RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NUS1Q96E22 293 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 CITED4Q96RK1 184 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 WFDC6Q9BQY6 131 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 HDHD5Q9BXW7 423 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 HDHD2Q9H0R4 259 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 ZCCHC4Q9H5U6 513 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 EGLN3Q9H6Z9 239 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 ZFP64Q9NPA5 681 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 ENAMQ9NRM1 1142 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 BABAM2Q9NXR7 383 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 GLTPQ9NZD2 209 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 TRPC4Q9UBN4 977 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 FKBP7Q9Y680 259 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 TLN1Q9Y490 2541 aaKnown RBP10.65□□□□□ -0.7
USF1-201ENST00000368019 MAST4O15021 2626 aa10.65□□□□□ -0.71
USF1-201ENST00000368019 MEIKINA0A087WXM9 373 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 A0A0A6YYJ9 748 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SHISA3A0PJX4 238 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 J3QKU1 62 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 FABP7O15540 132 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 ZNF749O43361 778 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 EMC8O43402 210 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 AKR7A2O43488 359 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 TMPRSS11DO60235 418 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SC5DO75845 299 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 UBL3O95164 117 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 CELA2BP08218 269 aaPredicted RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 SAGP10523 405 aaPredicted RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 PAICSP22234 425 aaKnown RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 BTCP35070 178 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SOX18P35713 384 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 TRIM23P36406 574 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 MMP15P51511 669 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 TSTA3Q13630 321 aaPredicted RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 FCN2Q15485 313 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 ZIC1Q15915 447 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 NTRK2Q16620 822 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SMUG1Q53HV7 270 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 FAM205BPQ63HN1 556 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SLC22A10Q63ZE4 541 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 RAET1GQ6H3X3 334 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 MRM1Q6IN84 353 aaKnown RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 BTN2A1Q7KYR7 527 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SLC51BQ86UW2 128 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 TRAPPC5Q8IUR0 188 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 RNF113BQ8IZP6 322 aaKnown RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 ANKRD53Q8N9V6 530 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 ZNF680Q8NEM1 530 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 OR2T33Q8NG76 320 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 PHYHIPQ92561 330 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 LIN37Q96GY3 246 aaPredicted RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 LCORQ96JN0 433 aaPredicted RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 LRFN5Q96NI6 719 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 F2RL3Q96RI0 385 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 CCDC3Q9BQI4 270 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 TMED9Q9BVK6 235 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SARGQ9BW04 601 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SORBS1Q9BX66 1292 aaKnown RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 RAB11FIP5Q9BXF6 653 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 ABCG5Q9H222 651 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 OR51J1Q9H342 316 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 IMP3Q9NV31 184 aaKnown RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 MED9Q9NWA0 146 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 CUEDC1Q9NWM3 386 aaPredicted RBP10.64□□□□□ -0.71
USF1-201ENST00000368019 NTMQ9P121 344 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 PTGFRNQ9P2B2 879 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SLC23A1Q9UHI7 598 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 BAIAP2Q9UQB8 552 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 ASF1AQ9Y294 204 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 SPTA1P02549 2419 aa10.64□□□□□ -0.71
USF1-201ENST00000368019 CCDC187A0A096LP49 1063 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 TRAV1-2A0A0B4J238 106 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 NAP1L6A6NFF2 107 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 ZSCAN5BA6NJL1 495 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 SLC22A31A6NKX4 558 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 DUXAA6NLW8 204 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 GPR89AB7ZAQ6 455 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 EFSO43281 561 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 TPPPO94811 219 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 SOX30O94993 753 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 TNFSF15O95150 251 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 SERPINA3P01011 423 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 PDGFAP04085 211 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 IFI6P09912 130 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 GPR89BP0CG08 455 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 SULT1A3P0DMM9 295 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 SULT1A4P0DMN0 295 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 C6P13671 934 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 TYRP1P17643 537 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 BUD31P41223 144 aaPredicted RBP10.63□□□□□ -0.71
USF1-201ENST00000368019 GPR1P46091 355 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 CAV3P56539 151 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 CTBP2P56545 445 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 TAGLNQ01995 201 aaKnown RBP10.63□□□□□ -0.71
USF1-201ENST00000368019 DHODHQ02127 395 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 CLN3Q13286 438 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 LY6DQ14210 128 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 GALEQ14376 348 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 AGERQ15109 404 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms