RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 HRASLSQ9HDD0 168 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 MRPS30Q9NP92 439 aaKnown RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 POT1Q9NUX5 634 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ZNF780BQ9Y6R6 833 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 SPEGQ15772 3267 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ABHD14A-ACY1A0A1B0GW23 586 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ZNF860A6NHJ4 632 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 VEGFDO43915 354 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ASGR2P07307 311 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 GALP22466 123 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 GDI2P50395 445 aaKnown RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 RPS15P62841 145 aaKnown RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 CDK3Q00526 305 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 OR1Q1Q15612 314 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ZNF77Q15935 545 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 MFSD12Q6NUT3 480 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ZC3H14Q6PJT7 736 aaKnown RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 APOOLQ6UXV4 268 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 TPRA1Q86W33 373 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 SDR9C7Q8NEX9 313 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ZCCHC10Q8TBK6 192 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 BPIFA2Q96DR5 249 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 KLHL15Q96M94 604 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ZNF681Q96N22 645 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 NANSQ9NR45 359 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 MBNL1Q9NR56 388 aaKnown RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 YBX2Q9Y2T7 364 aaKnown RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 KCNMB2Q9Y691 235 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 FAM86C2PA6NEL3 165 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 OTOL1A6NHN0 477 aaPredicted RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 SC5DO75845 299 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 CCR9P51686 369 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 TRMT12Q53H54 448 aaKnown RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 LILRA6Q6PI73 481 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 CFAP77Q6ZQR2 320 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 FGD2Q7Z6J4 655 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 GPAT4Q86UL3 456 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 LNX2Q8N448 690 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 OR4K13Q8NH42 304 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 BRIX1Q8TDN6 353 aaKnown RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 CXorf40AQ8TE69 158 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 SIPA1Q96FS4 1042 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 WBP1Q96G27 269 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 LRIG1Q96JA1 1093 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 SARGQ9BW04 601 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ST6GALNAC2Q9UJ37 374 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 KCNE5Q9UJ90 142 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 ZNF223Q9UK11 482 aaPredicted RBP12.55□□□□□ -0.4
PRKN-205ENST00000366897 POMT2Q9UKY4 750 aa12.55□□□□□ -0.4
PRKN-205ENST00000366897 TRANK1O15050 2925 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 CXorf51AA0A1B0GTR3 108 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 CHURC1-FNTBB4DL54 471 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 PCDH8O95206 1070 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ICAM2P13598 275 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 NAGAP17050 411 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 DCTDP32321 178 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ARHGAP19Q14CB8 494 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 MRM1Q6IN84 353 aaKnown RBP12.54□□□□□ -0.4
PRKN-205ENST00000366897 FAM198BQ6UWH4 519 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 BMP8AQ7Z5Y6 402 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 OR6M1Q8NGM8 313 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 PELI1Q96FA3 418 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 OR1F2PQ96R84 312 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 TNFRSF13CQ96RJ3 184 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ANKRD19PQ9H560 264 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ZNF576Q9H609 170 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 MEPEQ9NQ76 525 aaPredicted RBP12.54□□□□□ -0.4
PRKN-205ENST00000366897 CMC2Q9NRP2 79 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 GNG8Q9UK08 70 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 hCG_1807616A0A1W2PRN6 198 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 SLC22A31A6NKX4 558 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 RIIAD1A6NNX1 92 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 FAM171A2A8MVW0 826 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 KHDRBS3O75525 346 aaKnown RBP12.54□□□□□ -0.4
PRKN-205ENST00000366897 UCHL1P09936 223 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 CISD3P0C7P0 127 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 VIPR2P41587 438 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 WASP42768 502 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 NRG3P56975 720 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ERVK-21P61565 698 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 HYAL4Q2M3T9 481 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ARSKQ6UWY0 536 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 C3P1Q6ZMU1 363 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 FCRLAQ7L513 359 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ADGRG3Q86Y34 549 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 OR2L5Q8NG80 312 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ZNRF4Q8WWF5 429 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ST8SIA4Q92187 359 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 CNOT9Q92600 299 aaKnown RBP12.54□□□□□ -0.4
PRKN-205ENST00000366897 JAM3Q9BX67 310 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 PIPOXQ9P0Z9 390 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 MSRAQ9UJ68 235 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.54□□□□□ -0.4
PRKN-205ENST00000366897 RWDD3Q9Y3V2 267 aa12.54□□□□□ -0.4
PRKN-205ENST00000366897 TRAPPC13A5PLN9 417 aa12.53□□□□□ -0.4
PRKN-205ENST00000366897 L7N2F9 121 aa12.53□□□□□ -0.4
PRKN-205ENST00000366897 KHNYNO15037 678 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms