RNA–Protein interactions for RNA: ENST00000363468.1

RNU1-49P-201, Transcript of RNA, U1 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU1-49P, Length 159 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-49P-201ENST00000363468 ZGRF1Q86YA3 2104 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 IGKV1D-42A0A075B6H8 117 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TRGV5A0A0B4J1U4 118 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TRBV4-1A0A0J9YWV2 114 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SH3PXD2BA1X283 911 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 A8MVM7 634 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 NPIPA5E9PKD4 350 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 H0Y3Z8 333 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TNFRSF11BO00300 401 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 ZNF208O43345 1280 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SUSD5O60279 629 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 WISP2O76076 250 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 ACTL6AO96019 429 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 LDLRP01130 860 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 PEPDP12955 493 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 BMP7P18075 431 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 CCNA2P20248 432 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 FKBP2P26885 142 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 DNAJA1P31689 397 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 GCKP35557 465 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 RBM34P42696 430 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 STARP49675 285 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 CLK1P49759 484 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 IST1P53990 364 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 RAC1P63000 192 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 EGR4Q05215 589 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 FOXD4Q12950 439 aaPredicted RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 PPP1R8Q12972 351 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SELENBP1Q13228 472 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 RIPK1Q13546 671 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 RCN1Q15293 331 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SEC23BQ15437 767 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 EXOC3L2Q2M3D2 409 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 KRTCAP3Q53RY4 240 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 NHSL2Q5HYW2 709 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 FGD3Q5JSP0 725 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 DCST1Q5T197 706 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 VASNQ6EMK4 673 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 PODNL1Q6PEZ8 512 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TTC33Q6PID6 262 aaPredicted RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 C5orf46Q6UWT4 87 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TRILQ7L0X0 811 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TMEM179BQ7Z7N9 219 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 AMIGO2Q86SJ2 522 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 LSRQ86X29 649 aaPredicted RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 RNF113BQ8IZP6 322 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 PQLC1Q8N2U9 271 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 NEIL3Q8TAT5 605 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 RNF217Q8TC41 542 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SLC7A13Q8TCU3 470 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 STK35Q8TDR2 534 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TMEM255BQ8WV15 326 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 FAR1Q8WVX9 515 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TMEM239Q8WW34 195 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 ACOT11Q8WXI4 607 aaPredicted RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 ABTB1Q969K4 478 aaPredicted RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 DDIT4LQ96D03 193 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SNRNP40Q96DI7 357 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 CENPNQ96H22 339 aaPredicted RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 HS6ST2Q96MM7 605 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 EPYCQ99645 322 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 BARD1Q99728 777 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SLX1AQ9BQ83 275 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TMEM43Q9BTV4 400 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 BDH2Q9BUT1 245 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 ZNF426Q9BUY5 554 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SLC19A3Q9BZV2 496 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TSPAN10Q9H1Z9 355 aaPredicted RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SEMA6AQ9H2E6 1030 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 EXO5Q9H790 373 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 DCLRE1BQ9H816 532 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SERINC1Q9NRX5 453 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 VNN3Q9NY84 501 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 STX18Q9P2W9 335 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SPRR3Q9UBC9 169 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 STOML1Q9UBI4 398 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 CHRNA9Q9UGM1 479 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 TMCC3Q9ULS5 477 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 NPIPA1Q9UND3 350 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SLC6A5Q9Y345 797 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SAMHD1Q9Y3Z3 626 aaKnown RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SPIN1Q9Y657 262 aaPredicted RBP5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 AP4B1Q9Y6B7 739 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 U3KQV3 271 aa5.63□□□□□ -1.51
RNU1-49P-201ENST00000363468 SHANK1Q9Y566 2161 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 ATRXP46100 2492 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 TLN1Q9Y490 2541 aaKnown RBP5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 A0A087WUU8 490 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 A0A1B0GTH9 108 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 ZC3H12DA2A288 527 aaKnown RBP5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 HTR3EA5X5Y0 456 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 GJE1A6NN92 205 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 TTLL8A6PVC2 850 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 H3BML4 177 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 AQP7O14520 342 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 NPIPB7O75200 414 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 E2F6O75461 281 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 BAG2O95816 211 aa5.62□□□□□ -1.51
RNU1-49P-201ENST00000363468 IGF2P01344 180 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms