RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 OCLNQ16625 522 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 DGLUCYQ7Z3D6 616 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 ABHD12BQ7Z5M8 362 aaPredicted RBP12.84□□□□□ -0.35
CTR9-201ENST00000361367 SCGB3A2Q96PL1 93 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 AMBRA1Q9C0C7 1298 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 LHPPQ9H008 270 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 AHCTF1Q8WYP5 2266 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 LRRN3E7EW58 273 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 SLC19A2O60779 497 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 ELAVL4P26378 380 aaKnown RBP12.84□□□□□ -0.35
CTR9-201ENST00000361367 SPEM2Q0P670 501 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 MESP2Q0VG99 397 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 ZNF836Q6ZNA1 936 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 MEPCEQ7L2J0 689 aaKnown RBP12.84□□□□□ -0.35
CTR9-201ENST00000361367 GDF7Q7Z4P5 450 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 SLC35F3Q8IY50 421 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 FOXN4Q96NZ1 517 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 ATG5Q9H1Y0 275 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 SH2B3Q9UQQ2 575 aa12.84□□□□□ -0.35
CTR9-201ENST00000361367 TRAV36DV7A0A075B6V5 113 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 hCG_1807616A0A1W2PRN6 198 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 KLRC4-KLRK1H3BQV0 150 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 RAD1O60671 282 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 MRPS14O60783 128 aaKnown RBP12.83□□□□□ -0.35
CTR9-201ENST00000361367 PPICP45877 212 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 STARP49675 285 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 DAPP51397 102 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 SCRN3Q0VDG4 424 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 ZNF691Q5VV52 312 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 LINC01555Q8NAE3 123 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 CHDHQ8NE62 594 aaPredicted RBP12.83□□□□□ -0.35
CTR9-201ENST00000361367 HAVCR2Q8TDQ0 301 aa12.83□□□□□ -0.35
CTR9-201ENST00000361367 CNRIP1Q96F85 164 aaPredicted RBP12.83□□□□□ -0.35
CTR9-201ENST00000361367 FAM71F1Q96KD3 344 aaPredicted RBP12.83□□□□□ -0.35
CTR9-201ENST00000361367 LOC100509620A0A075B734 347 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 CHRNB1P11230 501 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 EPHA8P29322 1005 aaPredicted RBP12.83□□□□□ -0.36
CTR9-201ENST00000361367 RBPJQ06330 500 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 CMPK2Q5EBM0 449 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 ZNF322Q6U7Q0 402 aaPredicted RBP12.83□□□□□ -0.36
CTR9-201ENST00000361367 ZNF704Q6ZNC4 412 aaPredicted RBP12.83□□□□□ -0.36
CTR9-201ENST00000361367 CPEB2Q7Z5Q1 589 aaKnown RBP12.83□□□□□ -0.36
CTR9-201ENST00000361367 TMEM102Q8N9M5 508 aaPredicted RBP12.83□□□□□ -0.36
CTR9-201ENST00000361367 C16orf52Q8NHV5 167 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 TMEM255BQ8WV15 326 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 NEDD4LQ96PU5 975 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 CHST8Q9H2A9 424 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 DPAGT1Q9H3H5 408 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 CORINQ9Y5Q5 1042 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 KDM4EB2RXH2 506 aaPredicted RBP12.83□□□□□ -0.36
CTR9-201ENST00000361367 ZGLP1P0C6A0 271 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 RAB3BP20337 219 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 ZNF91Q05481 1191 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 TMEM69Q5SWH9 247 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 VASNQ6EMK4 673 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 ABI3BPQ7Z7G0 1075 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 NT5CQ8TCD5 201 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 HAVCR1Q96D42 359 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 OLAHQ9NV23 265 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 CNOT2Q9NZN8 540 aaKnown RBP12.83□□□□□ -0.36
CTR9-201ENST00000361367 FARSAQ9Y285 508 aaKnown RBP12.83□□□□□ -0.36
CTR9-201ENST00000361367 BCKDHBP21953 392 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 VAMP1P23763 118 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 PRPH2P23942 346 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 SOX3P41225 446 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 SLC35A1P78382 337 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 OR8S1Q8NH09 359 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 GPR148Q8TDV2 347 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 CSF3RQ99062 836 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 PIGQQ9BRB3 760 aa12.83□□□□□ -0.36
CTR9-201ENST00000361367 MRPS2Q9Y399 296 aaKnown RBP12.83□□□□□ -0.36
CTR9-201ENST00000361367 IGHV1OR21-1A0A087WYE8 117 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 C7orf72A4D263 438 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 EIF4E2O60573 245 aaKnown RBP12.82□□□□□ -0.36
CTR9-201ENST00000361367 UCHL1P09936 223 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 MSX1P28360 303 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 SLC26A5P58743 744 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 SMN1Q16637 294 aaKnown RBP12.82□□□□□ -0.36
CTR9-201ENST00000361367 NDUFA5Q16718 116 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 ARHGAP11BQ3KRB8 267 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 SPIN3Q5JUX0 258 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 SPRED1Q7Z699 444 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 OR2I1PQ8NGU4 316 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 OR5W2Q8NH69 310 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 IP6K3Q96PC2 410 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 FUZQ9BT04 418 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 SMURF1Q9HCE7 757 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 A0A1W2PQF6 199 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 UPK1AO00322 258 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 CHP2O43745 196 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 FCMRO60667 390 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 CELA2BP08218 269 aaPredicted RBP12.82□□□□□ -0.36
CTR9-201ENST00000361367 C21orf33P30042 268 aaPredicted RBP12.82□□□□□ -0.36
CTR9-201ENST00000361367 APLNRP35414 380 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 ZNF45Q02386 682 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 TMED4Q7Z7H5 227 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 RBM45Q8IUH3 476 aaKnown RBP12.82□□□□□ -0.36
CTR9-201ENST00000361367 DTWD2Q8NBA8 298 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 MORN4Q8NDC4 146 aa12.82□□□□□ -0.36
CTR9-201ENST00000361367 SGCDQ92629 289 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms