RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 SMAD6O43541 496 aaKnown RBP11.84□□□□□ -0.51
COL6A3-203ENST00000353578 ZP2Q05996 745 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 UNC50Q53HI1 259 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 DYNC2LI1Q8TCX1 351 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 TCRBV7S3A2A0A539 114 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 GLTPD2A6NH11 291 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 KCNJ13O60928 360 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 MRPL3P09001 348 aaKnown RBP11.84□□□□□ -0.51
COL6A3-203ENST00000353578 NAGAP17050 411 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 GABRR2P28476 465 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 STEAP1BQ6NZ63 245 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 MEPCEQ7L2J0 689 aaKnown RBP11.84□□□□□ -0.51
COL6A3-203ENST00000353578 PLA2G15Q8NCC3 412 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 ST8SIA2Q92186 375 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 RNF11Q9Y3C5 154 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 OPN1MWP04001 364 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 OPN1MW2P0DN77 364 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 OPN1MW3P0DN78 364 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 STK19P49842 368 aaPredicted RBP11.84□□□□□ -0.51
COL6A3-203ENST00000353578 UBE2G2P60604 165 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 SERTAD2Q14140 314 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 NKPD1Q17RQ9 610 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 RELL2Q8NC24 303 aaPredicted RBP11.84□□□□□ -0.51
COL6A3-203ENST00000353578 OR13C8Q8NGS7 320 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 SLC22A12Q96S37 553 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 INTS14Q96SY0 518 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 B3GALT1Q9Y5Z6 326 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 A0A1W2PQH9 124 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 CDS1Q92903 461 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 GCM1Q9NP62 436 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 MUTYHQ9UIF7 546 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 KNG1P01042 644 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 ADRA2CP18825 462 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 EPHA5P54756 1037 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 Q499Y3 187 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 FBXW12Q6X9E4 464 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 OR51T1Q8NGJ9 327 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 SEMA6CQ9H3T2 930 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 BRINP1O60477 761 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 BEX3Q00994 111 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 LRRTM4Q86VH4 590 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 C2CD4CQ8TF44 421 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 FYTTD1Q96QD9 318 aaKnown RBP11.84□□□□□ -0.51
COL6A3-203ENST00000353578 NUDT16L1Q9BRJ7 211 aaKnown RBP11.84□□□□□ -0.51
COL6A3-203ENST00000353578 SEC61A2Q9H9S3 476 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 SUSD2Q9UGT4 822 aa11.84□□□□□ -0.51
COL6A3-203ENST00000353578 OR5H14A6NHG9 310 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 CORO1AP31146 461 aaKnown RBP11.83□□□□□ -0.51
COL6A3-203ENST00000353578 SOX10P56693 466 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 TEX30Q5JUR7 227 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 AFMIDQ63HM1 303 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 C1orf127Q8N9H9 656 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 SAT2Q96F10 170 aaPredicted RBP11.83□□□□□ -0.51
COL6A3-203ENST00000353578 POFUT1Q9H488 388 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 PDE7BQ9NP56 450 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 FZD3Q9NPG1 666 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 SERTAD4Q9NUC0 356 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.51
COL6A3-203ENST00000353578 PEAK1Q9H792 1746 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 FBXO24O75426 580 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 PLBD1Q6P4A8 553 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 TMEM220Q6QAJ8 160 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 ABHD15Q6UXT9 468 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 OR2L13Q8N349 312 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 PSAT1Q9Y617 370 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 NALCNQ8IZF0 1738 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.83□□□□□ -0.52
COL6A3-203ENST00000353578 SLC22A20A6NK97 555 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 SOX15O60248 233 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 DEDDO75618 318 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 NME1P15531 152 aaKnown RBP11.83□□□□□ -0.52
COL6A3-203ENST00000353578 USF1P22415 310 aaPredicted RBP11.83□□□□□ -0.52
COL6A3-203ENST00000353578 OPRD1P41143 372 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 KCNJ3P48549 501 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 CLINT1Q14677 625 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 CEBPEQ15744 281 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 ECM1Q16610 540 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 FAM110BQ8TC76 370 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 NUS1Q96E22 293 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 PGAM5Q96HS1 289 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 A0A0A6YYJ9 748 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 LOC730098B7Z3J9 87 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 ADPRMQ3LIE5 342 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 C6orf120Q7Z4R8 191 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 CPNE8Q86YQ8 564 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 LMNTD1Q8N9Z9 388 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 PSMG2Q969U7 264 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 IMP4Q96G21 291 aaKnown RBP11.83□□□□□ -0.52
COL6A3-203ENST00000353578 LRIG1Q96JA1 1093 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 GAL3ST4Q96RP7 486 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 DEFB129Q9H1M3 183 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 ACSS2Q9NR19 701 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 MOKQ9UQ07 419 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 RNF24Q9Y225 148 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 ZNF98A6NK75 572 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 NFATC1O95644 943 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 GABRB1P18505 474 aa11.83□□□□□ -0.52
COL6A3-203ENST00000353578 KRTCAP2Q8N6L1 136 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms