RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SNX13Q9Y5W8 968 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 NCKAP5O14513 1909 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 GCN1Q92616 2671 aaKnown RBP10.66□□□□□ -0.7
SNCA-202ENST00000345009 TMED7-TICAM2A0A0A6YYA0 188 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 CD8B2A6NJW9 211 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 ELOA3DA6NLF2 546 aaPredicted RBP10.66□□□□□ -0.7
SNCA-202ENST00000345009 ZNHIT1O43257 154 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 ZNF208O43345 1280 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 FRS3O43559 492 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 EPPINO95925 133 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 IL2RAP01589 272 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 TFPIP10646 304 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 FCGR2AP12318 317 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 PRG2P13727 222 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 CD247P20963 164 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 SFTPDP35247 375 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 EIF1AXP47813 144 aaKnown RBP10.66□□□□□ -0.7
SNCA-202ENST00000345009 CLDN15P56746 228 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 CSNK2A1P68400 391 aaPredicted RBP10.66□□□□□ -0.7
SNCA-202ENST00000345009 NRF1Q16656 503 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 ELOA3BQ3SY89 546 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 GLIPR1L2Q4G1C9 344 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 SYT14P1Q58G82 188 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 EMC4Q5J8M3 183 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 EEF1A1P5Q5VTE0 462 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 NSUN5P2Q63ZY6 315 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 HBMQ6B0K9 141 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 RPTNQ6XPR3 784 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 CCDC121Q6ZUS5 278 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 P4HA3Q7Z4N8 544 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 LACC1Q8IV20 430 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 FAM26EQ8N5C1 309 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 ELOA3Q8NG57 546 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 OR10Q1Q8NGQ4 319 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 OR2V1Q8NHB1 315 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 RNF217Q8TC41 542 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 POC1BQ8TC44 478 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 RND1Q92730 232 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 MCUR1Q96AQ8 359 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 SLC47A1Q96FL8 570 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 NSMCE2Q96MF7 247 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 TRIB1Q96RU8 372 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 MCHR1Q99705 422 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 TM9SF2Q99805 663 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 ARHGDIGQ99819 225 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 THTPAQ9BU02 230 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 PRRG4Q9BZD6 226 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 POLR2J2Q9GZM3 115 aaKnown RBP10.66□□□□□ -0.7
SNCA-202ENST00000345009 POLR2J3Q9H1A7 115 aaKnown RBP10.66□□□□□ -0.7
SNCA-202ENST00000345009 TMEM185BQ9H7F4 350 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 C12orf10Q9HB07 376 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 CTPS2Q9NRF8 586 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 COQ3Q9NZJ6 369 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 ERRFI1Q9UJM3 462 aaPredicted RBP10.66□□□□□ -0.7
SNCA-202ENST00000345009 OSGIN1Q9UJX0 560 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 MCTS1Q9ULC4 181 aaKnown RBP10.66□□□□□ -0.7
SNCA-202ENST00000345009 TMED7Q9Y3B3 224 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 HDGFL3Q9Y3E1 203 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 CHST2Q9Y4C5 530 aa10.66□□□□□ -0.7
SNCA-202ENST00000345009 SPTAN1Q13813 2472 aaKnown RBP10.65□□□□□ -0.7
SNCA-202ENST00000345009 SPENQ96T58 3664 aaKnown RBP10.65□□□□□ -0.7
SNCA-202ENST00000345009 SLC22A20A6NK97 555 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 CLCA1A8K7I4 914 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 A8MVM7 634 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 PYCARD-AS1I3L0S3 204 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 ADAM11O75078 769 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 SERPINA1P01009 418 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 IFNW1P05000 195 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 NCK1P16333 377 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 TIMP3P35625 211 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 ZNF136P52737 540 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 CLDN20P56880 219 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 HOXC5Q00444 222 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 PLAURQ03405 335 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 PMPCAQ10713 525 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 CEACAM7Q14002 265 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 TRIM25Q14258 630 aaKnown RBP10.65□□□□□ -0.7
SNCA-202ENST00000345009 OR1Q1Q15612 314 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 ACSF3Q4G176 576 aaPredicted RBP10.65□□□□□ -0.7
SNCA-202ENST00000345009 IFI44LQ53G44 452 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 MTX3Q5HYI7 312 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 ALG10BQ5I7T1 473 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 DCST1Q5T197 706 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 OR2A2Q6IF42 318 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 ZNF613Q6PF04 617 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 C5orf46Q6UWT4 87 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 C6orf89Q6UWU4 347 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 C3P1Q6ZMU1 363 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 CBLL1Q75N03 491 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 CYP4Z1Q86W10 505 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 CARM1Q86X55 608 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 DHFR2Q86XF0 187 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 ADGRG3Q86Y34 549 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 GPR32P1Q8NGA4 272 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 OR6T1Q8NGN1 323 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 VANGL1Q8TAA9 524 aaPredicted RBP10.65□□□□□ -0.7
SNCA-202ENST00000345009 GEMIN6Q8WXD5 167 aaKnown RBP10.65□□□□□ -0.7
SNCA-202ENST00000345009 OSTF1Q92882 214 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 ZHX1-C8orf76Q96EF9 292 aa10.65□□□□□ -0.7
SNCA-202ENST00000345009 LRGUKQ96M69 825 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms