RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ARMC7Q9H6L4 198 aa12.47□□□□□ -0.41
TPM4-202ENST00000344824 PTGES2Q9H7Z7 377 aa12.47□□□□□ -0.41
TPM4-202ENST00000344824 DCLRE1BQ9H816 532 aa12.47□□□□□ -0.41
TPM4-202ENST00000344824 YY1AP1Q9H869 796 aa12.47□□□□□ -0.41
TPM4-202ENST00000344824 CTPS2Q9NRF8 586 aa12.47□□□□□ -0.41
TPM4-202ENST00000344824 ARMC1Q9NVT9 282 aa12.47□□□□□ -0.41
TPM4-202ENST00000344824 NOTCH2Q04721 2471 aa12.47□□□□□ -0.41
TPM4-202ENST00000344824 HEATR5AQ86XA9 2040 aa12.47□□□□□ -0.41
TPM4-202ENST00000344824 CDHR4A6H8M9 788 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 KDM4EB2RXH2 506 aaPredicted RBP12.46□□□□□ -0.41
TPM4-202ENST00000344824 H3BNH8 94 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 C19orf84I3L1E1 186 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 J3KTA2 159 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 SYT5O00445 386 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 HNRNPRO43390 633 aaKnown RBP12.46□□□□□ -0.41
TPM4-202ENST00000344824 OIP5O43482 229 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 NDUFB5O43674 189 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 GLI4P10075 376 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 UBL4AP11441 157 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 STARP49675 285 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 CCR4P51679 360 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 DSCR4P56555 118 aaPredicted RBP12.46□□□□□ -0.41
TPM4-202ENST00000344824 PLAURQ03405 335 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 NRF1Q16656 503 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 ACSF3Q4G176 576 aaPredicted RBP12.46□□□□□ -0.41
TPM4-202ENST00000344824 UBQLNLQ8IYU4 475 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 PAPD5Q8NDF8 572 aaKnown RBP12.46□□□□□ -0.41
TPM4-202ENST00000344824 OR2M3Q8NG83 312 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 OR6T1Q8NGN1 323 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 OR5M1Q8NGP8 315 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 RNF138Q8WVD3 245 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 NTNG2Q96CW9 530 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 C7orf34Q96L11 122 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 UCK2Q9BZX2 261 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 RNPEPL1Q9HAU8 725 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 CHST11Q9NPF2 352 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 IL1RAPQ9NPH3 570 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 DNAJB12Q9NXW2 375 aaKnown RBP12.46□□□□□ -0.41
TPM4-202ENST00000344824 VDAC3Q9Y277 283 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 CARD8Q9Y2G2 431 aa12.46□□□□□ -0.41
TPM4-202ENST00000344824 ITPR2Q14571 2701 aa12.46□□□□□ -0.42
TPM4-202ENST00000344824 A0A0G2JNJ9 132 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 CPSF4LA6NMK7 179 aaKnown RBP12.45□□□□□ -0.42
TPM4-202ENST00000344824 B4DXG7 233 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 GNGT2O14610 69 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 SEC14L5O43304 696 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 ACTL6AO96019 429 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 CST1P01037 141 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 PRG2P13727 222 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 COX6B1P14854 86 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 FASP25445 335 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 RYKP34925 604 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 ADH7P40394 386 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 RIPK1Q13546 671 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 GANABQ14697 944 aaKnown RBP12.45□□□□□ -0.42
TPM4-202ENST00000344824 NPTX1Q15818 432 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 AP1ARQ63HQ0 302 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 HMBOX1Q6NT76 420 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 LILRA2Q8N149 483 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 PQLC1Q8N2U9 271 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 MARVELD3Q96A59 401 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 WDYHV1Q96HA8 205 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 PRDM14Q9GZV8 571 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 NDUFAF4Q9P032 175 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 RHCGQ9UBD6 479 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 Q9UFV3 132 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 SLC35A3Q9Y2D2 325 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 FAM32AQ9Y421 112 aaKnown RBP12.45□□□□□ -0.42
TPM4-202ENST00000344824 TESMINQ9Y4I5 508 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 ENPP4Q9Y6X5 453 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 ABCA12Q86UK0 2595 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 A0A1W2PQD3 144 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 SHISA8B8ZZ34 492 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 ALG1L2C9J202 215 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 H3BML4 177 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 AP3D1O14617 1153 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 ZNF264O43296 627 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 HCRTR2O43614 444 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 NGFRP08138 427 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 HOXD4P09016 255 aaPredicted RBP12.45□□□□□ -0.42
TPM4-202ENST00000344824 FCGR1AP12314 374 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 ITGA2P17301 1181 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 POU3F2P20265 443 aaPredicted RBP12.45□□□□□ -0.42
TPM4-202ENST00000344824 PTGER4P35408 488 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 MAGEA2P43356 314 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 SPIBQ01892 262 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 C17orf67Q0P5P2 114 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 PPP1R8Q12972 351 aaKnown RBP12.45□□□□□ -0.42
TPM4-202ENST00000344824 SF3B4Q15427 424 aaKnown RBP eCLIP12.45□□□□□ -0.426e-8■■■■□ 24.4
TPM4-202ENST00000344824 NHSL2Q5HYW2 709 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 PPP4R4Q6NUP7 873 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 PLXDC2Q6UX71 529 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 PLEKHM3Q6ZWE6 761 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 TSEN54Q7Z6J9 526 aaKnown RBP12.45□□□□□ -0.42
TPM4-202ENST00000344824 RANBP3LQ86VV4 465 aaPredicted RBP12.45□□□□□ -0.42
TPM4-202ENST00000344824 LSRQ86X29 649 aaPredicted RBP12.45□□□□□ -0.42
TPM4-202ENST00000344824 CMIPQ8IY22 773 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 FADS6Q8N9I5 356 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 ICA1LQ8NDH6 482 aa12.45□□□□□ -0.42
TPM4-202ENST00000344824 ZNF300Q96RE9 604 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms