RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SEC22CQ9BRL7 303 aa13.31□□□□□ -0.28
CPSF7-201ENST00000340437 MEPEQ9NQ76 525 aaPredicted RBP13.31□□□□□ -0.28
CPSF7-201ENST00000340437 COL4A3Q01955 1670 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 SZT2Q5T011 3432 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 OR6C74A6NCV1 312 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 POM121CA8CG34 1229 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 FGF17O60258 216 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 OR10H2O60403 315 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 CTSVO60911 334 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 CFL1P23528 166 aaKnown RBP13.3□□□□□ -0.28
CPSF7-201ENST00000340437 GJA4P35212 333 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 THBS2P35442 1172 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 PER3P56645 1201 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 POMZP3Q6PJE2 187 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 MFSD9Q8NBP5 474 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 ERVMER34-1Q9H9K5 563 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 FKRPQ9H9S5 495 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 NANSQ9NR45 359 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 MED17Q9NVC6 651 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 RPS6KB2Q9UBS0 482 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 GTF2A1LQ9UNN4 478 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 TRABD2BA6NFA1 517 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 C4orf47A7E2U8 309 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 HK1P19367 917 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 NDUFS1P28331 727 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 BTCP35070 178 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 RPS27P42677 84 aaKnown RBP13.3□□□□□ -0.28
CPSF7-201ENST00000340437 VEGFCP49767 419 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 TSPAN5P62079 268 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 EIPR1Q53HC9 387 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 ZBTB37Q5TC79 503 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 TMEM52Q8NDY8 209 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 POT1Q9NUX5 634 aa13.3□□□□□ -0.28
CPSF7-201ENST00000340437 GMDSO60547 372 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 SELENOFO60613 162 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 GDNFP39905 211 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 PGDP52209 483 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 ERV3-1Q14264 604 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 ANGPT1Q15389 498 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 SLC36A2Q495M3 483 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 ALG10BQ5I7T1 473 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 TEX261Q6UWH6 196 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 FCRLAQ7L513 359 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF619Q8N2I2 560 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 YIPF5Q969M3 257 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 NMNAT3Q96T66 252 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 TEX101Q9BY14 249 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 SEMA4CQ9C0C4 833 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 ADGRL4Q9HBW9 690 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 MRPL39Q9NYK5 338 aaKnown RBP13.29□□□□□ -0.28
CPSF7-201ENST00000340437 GLTPQ9NZD2 209 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 KLK11Q9UBX7 282 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 COLEC10Q9Y6Z7 277 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 U3KQ87 197 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 BLOC1S5-TXNDC5H3BN57 136 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 TRIM3O75382 744 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-201ENST00000340437 HIST1H1CP16403 213 aaKnown RBP13.29□□□□□ -0.28
CPSF7-201ENST00000340437 RAB14P61106 215 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 FBXO42Q6P3S6 717 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 COMMD7Q86VX2 200 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 RAB7BQ96AH8 199 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 HSPA12BQ96MM6 686 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 TSSK2Q96PF2 358 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 HDAC8Q9BY41 377 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 RANBP3Q9H6Z4 567 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-201ENST00000340437 ZFP64Q9NPA5 681 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF69Q9UC07 566 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 SIGLEC7Q9Y286 467 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 RP1P56715 2156 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 EYSQ5T1H1 3165 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 MEIS3P1A6NDR6 274 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 ARPC1BO15143 372 aaKnown RBP13.29□□□□□ -0.28
CPSF7-201ENST00000340437 RNGTTO60942 597 aaKnown RBP13.29□□□□□ -0.28
CPSF7-201ENST00000340437 CT62P0C5K7 136 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 SELENOPP49908 381 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 GBX2P52951 348 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-201ENST00000340437 TNFRSF17Q02223 184 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 SNTA1Q13424 505 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 PXDC1Q5TGL8 231 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 KISS1RQ969F8 398 aaPredicted RBP13.29□□□□□ -0.28
CPSF7-201ENST00000340437 APOOQ9BUR5 198 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 TMEM168Q9H0V1 697 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 NOX4Q9NPH5 578 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 CMC2Q9NRP2 79 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 KCMF1Q9P0J7 381 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 SLC35A3Q9Y2D2 325 aa13.29□□□□□ -0.28
CPSF7-201ENST00000340437 A0A1B0GWA3 101 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 KLF4O43474 513 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 RAD1O60671 282 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 ALDOBP05062 364 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 PROS1P07225 676 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 LINC00271P0C7V0 271 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 IGFALSP35858 605 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 EMDP50402 254 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 GAB4Q2WGN9 574 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 HSD17B12Q53GQ0 312 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 METTL27Q8N6F8 245 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 DNAAF1Q8NEP3 725 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 C1orf216Q8TAB5 229 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms