RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 TRAV1-2A0A0B4J238 106 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 LAMTOR5O43504 91 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ALOX12BO75342 701 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 NME6O75414 186 aaPredicted RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CEACAM4O75871 244 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CLIC3O95833 236 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ABCD3P28288 659 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ATXN3P54252 364 aaPredicted RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 B3GALT5-AS1P59052 145 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF117Q03924 483 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 LTBQ06643 244 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ATP1A4Q13733 1029 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 SGCBQ16585 318 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF829Q3KNS6 432 aaPredicted RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 SPDYE7PQ495Y7 208 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 DTX1Q86Y01 620 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CDC20BQ86Y33 519 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF786Q8N393 782 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 COX18Q8N8Q8 333 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 OR2T33Q8NG76 320 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 MFSD8Q8NHS3 518 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 RFKQ969G6 155 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 TGM7Q96PF1 710 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 TRBV5-5A0A0J9YX44 114 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 MYOCOSA0A1B0GUC4 107 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 C17orf105B2RV13 164 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CLPXO76031 633 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 INMTO95050 263 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 MAOAP21397 527 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 SSTR4P31391 388 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 APOBEC1P41238 236 aaKnown RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CDH15P55291 814 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ACTC1P68032 377 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ACTA1P68133 377 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 C1orf61Q13536 156 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 EXOSC7Q15024 291 aaKnown RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 GPR139Q6DWJ6 353 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CPEB2Q7Z5Q1 589 aaKnown RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF227Q86WZ6 799 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 OR2Y1Q8NGV0 311 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 POC1BQ8TC44 478 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 PIK3R3Q92569 461 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 GPR87Q9BY21 358 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 MRPL13Q9BYD1 178 aaKnown RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 GAREM1Q9H706 876 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF556Q9HAH1 456 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 C20orf141Q9NUB4 165 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 FAM32AQ9Y421 112 aaKnown RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 GLOD5A6NK44 160 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 AP3D1O14617 1153 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF264O43296 627 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ICMTO60725 284 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 PMS2P2O95744 297 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 PDGFBP01127 241 aaPredicted RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 PTHP01270 115 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 GABRA3P34903 492 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 CD96P40200 585 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF85Q03923 595 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 SPCS2Q15005 226 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ST3GAL2Q16842 350 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 OTUD3Q5T2D3 398 aaPredicted RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 PDZK1Q5T2W1 519 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 PWWP2BQ6NUJ5 590 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 Q6ZNX1 250 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 USP43Q70EL4 1123 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZNF321PQ8N8H1 164 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 SSC4DQ8WTU2 575 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 XAGE5Q8WWM1 108 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ZBTB8AQ96BR9 441 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 BPIFA2Q96DR5 249 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ADGRG7Q96K78 797 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 MRGPRX4Q96LA9 322 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 COPS4Q9BT78 406 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 NDC1Q9BTX1 674 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 TRAF4Q9BUZ4 470 aaPredicted RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 OR2B2Q9GZK3 357 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 NXF5Q9H1B4 397 aaKnown RBP4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 MMP27Q9H306 513 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 ERVK13-1Q9NX77 482 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 KCNG2Q9UJ96 466 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 SNX8Q9Y5X2 465 aa4.88□□□□□ -1.63
PRPF4B-201ENST00000337659 TTC28Q96AY4 2481 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 A0A0G2JK05 382 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 PIP5K1CO60331 668 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 DIRAS1O95057 198 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 POLR2HP52434 150 aaKnown RBP4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 WNT4P56705 351 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 MLF1P58340 268 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 INSM1Q01101 510 aaPredicted RBP4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 PLPPR5Q32ZL2 321 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 NKAIN1Q4KMZ8 207 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 EEF1A1P5Q5VTE0 462 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 TIGD3Q6B0B8 471 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 LCN10Q6JVE6 187 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 METAP1DQ6UB28 335 aaPredicted RBP4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 PHC2Q8IXK0 858 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 TIGD4Q8IY51 512 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 ZCCHC10Q8TBK6 192 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 CHPT1Q8WUD6 406 aa4.87□□□□□ -1.63
PRPF4B-201ENST00000337659 ITPKCQ96DU7 683 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms