RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 KCNJ10P78508 379 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 LRRC74AQ0VAA2 488 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 FAPQ12884 760 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 CASP8Q14790 479 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 PDK3Q15120 406 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 MAPK14Q16539 360 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 FAM174BQ3ZCQ3 159 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 AGAP6Q5VW22 663 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 FBXW9Q5XUX1 488 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 SAXO2Q658L1 398 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 KLHL17Q6TDP4 642 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 DNAJC14Q6Y2X3 702 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF621Q6ZSS3 439 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 OLIG3Q7RTU3 272 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.43□□□□□ -0.9
CAPN3-202ENST00000337571 CROCCP2Q86T23 111 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 LRRC34Q8IZ02 419 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 LILRB1Q8NHL6 650 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-202ENST00000337571 PIGXQ8TBF5 258 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 PMM1Q92871 262 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 NEUROG1Q92886 237 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 APH1AQ96BI3 265 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF524Q96C55 264 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 DDIT4LQ96D03 193 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 NEURL3Q96EH8 262 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 HS6ST2Q96MM7 605 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 PANX1Q96RD7 426 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 NUF2Q9BZD4 464 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 MTHFD2LQ9H903 347 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-202ENST00000337571 CTPS2Q9NRF8 586 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 ASB6Q9NWX5 421 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 CHRNA9Q9UGM1 479 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 POU2F3Q9UKI9 436 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 MGAT4BQ9UQ53 548 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 HDGFL3Q9Y3E1 203 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 MAGED1Q9Y5V3 778 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-202ENST00000337571 NSD1Q96L73 2696 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-202ENST00000337571 FREM1Q5H8C1 2179 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 CENPVL1A0A0U1RR11 272 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 CCDC154A6NI56 674 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 OR5H1A6NKK0 313 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 INAFM1C9JVW0 142 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 E9PBE3 544 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 OVOL3O00110 214 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 ABCD4O14678 606 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 DNPH1O43598 174 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 KIAA0513O60268 411 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 PMS2P2O95744 297 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 SOD3P08294 240 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 DANCRP0C864 163 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 IL7RP16871 459 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 BGNP21810 368 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 IGHV1-2P23083 117 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 CDKN1AP38936 164 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 NME5P56597 212 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 TXNL4AP83876 142 aaKnown RBP9.42□□□□□ -0.9
CAPN3-202ENST00000337571 CHRNEQ04844 493 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 SPANXN4Q5MJ08 99 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 HHATQ5VTY9 493 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 OR7E24Q6IFN5 339 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 SLC22A25Q6T423 547 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 TMEM108Q6UXF1 575 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 SPATA19Q7Z5L4 167 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 CMIPQ8IY22 773 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 MREGQ8N565 214 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 KBTBD8Q8NFY9 601 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF75CPQ92670 426 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-202ENST00000337571 ZG16BQ96DA0 208 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 TRNT1Q96Q11 434 aaKnown RBP9.42□□□□□ -0.9
CAPN3-202ENST00000337571 OR52E6Q96RD3 313 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 ZBTB18Q99592 522 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 NAA11Q9BSU3 229 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-202ENST00000337571 CCDC106Q9BWC9 280 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 REG4Q9BYZ8 158 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 SAP130Q9H0E3 1048 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 BARX1Q9HBU1 254 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-202ENST00000337571 EXOSC3Q9NQT5 275 aaKnown RBP9.42□□□□□ -0.9
CAPN3-202ENST00000337571 PNPOQ9NVS9 261 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 PARPBPQ9NWS1 579 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 TMEM181Q9P2C4 612 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 UPB1Q9UBR1 384 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 BTNL2Q9UIR0 455 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 ING1Q9UK53 422 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-202ENST00000337571 TRAPPC4Q9Y296 219 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 ZANQ9Y493 2812 aa9.42□□□□□ -0.9
CAPN3-202ENST00000337571 IGKV3D-15A0A087WSY6 115 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 TMED7-TICAM2A0A0A6YYA0 188 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 EIF1BO60739 113 aaKnown RBP9.41□□□□□ -0.9
CAPN3-202ENST00000337571 RAMP1O60894 148 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 SCN2BO60939 215 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 RAD51DO75771 328 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 PGM3O95394 542 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 IGHV3-9P01782 118 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 NR2F1P10589 423 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 COX5AP20674 150 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 PTAFRP25105 342 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 POLR2HP52434 150 aaKnown RBP9.41□□□□□ -0.9
CAPN3-202ENST00000337571 MAP2K6P52564 334 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 CDH11P55287 796 aa9.41□□□□□ -0.9
CAPN3-202ENST00000337571 PHC1P78364 1004 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms