RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 EXOSC3Q9NQT5 275 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 PLSCR4Q9NRQ2 329 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 THUMPD1Q9NXG2 353 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 GALNT8Q9NY28 637 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 ZIM2Q9NZV7 527 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 GIMAP2Q9UG22 337 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 NDRG3Q9UGV2 375 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 LIPT1Q9Y234 373 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SLC35A3Q9Y2D2 325 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 RPH3AQ9Y2J0 694 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 TESMINQ9Y4I5 508 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SNX8Q9Y5X2 465 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 GPR45Q9Y5Y3 372 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 UNC79Q9P2D8 2635 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 RNF103-CHMP3A0A140T963 221 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 H3BML4 177 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 ZNF264O43296 627 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 DNPH1O43598 174 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 PSPNO60542 156 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 TMCC2O75069 709 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 TGM6O95932 706 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 IL6P05231 212 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 UBL4AP11441 157 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 MATN1P21941 496 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 S100A3P33764 101 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 CD79BP40259 229 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SUCLG1P53597 346 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 SRYQ05066 204 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 STX5Q13190 355 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SKP2Q13309 424 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 CBFBQ13951 182 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 PON3Q15166 354 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 RNPS1Q15287 305 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 CD226Q15762 336 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 ZSWIM7Q19AV6 140 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 PGS1Q32NB8 556 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 TMEM200AQ86VY9 491 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SLC43A2Q8N370 569 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 DRAXINQ8NBI3 349 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 OR4A15Q8NGL6 344 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 OR5W2Q8NH69 310 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 OR10D3Q8NH80 312 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 OR2V1Q8NHB1 315 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 POC1BQ8TC44 478 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 GPR119Q8TDV5 335 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SLC25A43Q8WUT9 341 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 TMEM234Q8WY98 164 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 INTS12Q96CB8 462 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 ZNF845Q96IR2 970 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 KLHL15Q96M94 604 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 C7orf26Q96N11 449 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 TRNT1Q96Q11 434 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 ZBTB18Q99592 522 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 PINK1Q9BXM7 581 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 POLDIP3Q9BY77 421 aaKnown RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 NUF2Q9BZD4 464 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 CENPHQ9H3R5 247 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 MANSC1Q9H8J5 431 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 SDR39U1Q9NRG7 319 aaPredicted RBP5.67□□□□□ -1.5
SMG1-201ENST00000330588 FBXO34Q9NWN3 711 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 GMEB1Q9Y692 573 aa5.67□□□□□ -1.5
SMG1-201ENST00000330588 WDR91A4D1P6 747 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 SH3D21A4FU49 640 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 SERINC4A6NH21 518 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 GTPBP1O00178 669 aaKnown RBP5.66□□□□□ -1.5
SMG1-201ENST00000330588 SYNGR4O95473 234 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 CNOT4O95628 575 aaKnown RBP5.66□□□□□ -1.5
SMG1-201ENST00000330588 KRT75O95678 551 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 ALDOCP09972 364 aaKnown RBP5.66□□□□□ -1.5
SMG1-201ENST00000330588 PRKCAP17252 672 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 PGCP20142 388 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 RPS4Y1P22090 263 aaKnown RBP5.66□□□□□ -1.5
SMG1-201ENST00000330588 SOAT1P35610 550 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 SLC6A8P48029 635 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 CPA2P48052 419 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 RFX3P48380 749 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 CLDN20P56880 219 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 KRTAP10-9P60411 292 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 MAGOHP61326 146 aaKnown RBP5.66□□□□□ -1.5
SMG1-201ENST00000330588 SUMO1P63165 101 aaKnown RBP5.66□□□□□ -1.5
SMG1-201ENST00000330588 PHC1P78364 1004 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 FOXF2Q12947 444 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 PDK3Q15120 406 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 SGCBQ16585 318 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 ZNF239Q16600 458 aaKnown RBP5.66□□□□□ -1.5
SMG1-201ENST00000330588 FAM174BQ3ZCQ3 159 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 SPANXN4Q5MJ08 99 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMG1-201ENST00000330588 CCNJQ5T5M9 372 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 PRAMEF8Q5VWM4 474 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 PRAMEF7Q5VXH5 474 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 HBMQ6B0K9 141 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 C3orf33Q6P1S2 294 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 EIF3MQ7L2H7 374 aaKnown RBP5.66□□□□□ -1.5
SMG1-201ENST00000330588 C16orf62Q7Z3J2 963 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 ZZZ3Q8IYH5 903 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 ZNF440Q8IYI8 595 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 CLECL1Q8IZS7 167 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 ZNF619Q8N2I2 560 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 FNDC9Q8TBE3 224 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms