RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 AKT2P31751 481 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 PSMB10P40306 273 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 ZNHIT3Q15649 155 aaPredicted RBP16.04■□□□□ 0.16
COL9A1-201ENST00000320755 LYPD4Q6UWN0 246 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 LRRC28Q86X40 367 aaPredicted RBP16.04■□□□□ 0.16
COL9A1-201ENST00000320755 OR4D9Q8NGE8 314 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 ACOT12Q8WYK0 555 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 PIAS3Q9Y6X2 628 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 A0A0J9YY10 115 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 CHP2O43745 196 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 FAM157BP0CG42 384 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 DRD5P21918 477 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 EVI2BP34910 448 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 PITPNBP48739 271 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 CLDN20P56880 219 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 BDH1Q02338 343 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 BCL2L15Q5TBC7 163 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 ZNF613Q6PF04 617 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 TRILQ7L0X0 811 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 OOSP2Q86WS3 158 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 SLC22A18ASQ8N1D0 253 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 OR6K6Q8NGW6 343 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 RIT1Q92963 219 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 PHF21AQ96BD5 680 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 AHCYL2Q96HN2 611 aaKnown RBP16.04■□□□□ 0.16
COL9A1-201ENST00000320755 SLC28A3Q9HAS3 691 aa16.04■□□□□ 0.16
COL9A1-201ENST00000320755 PLPP2O43688 288 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 SLC6A6P31641 620 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 THBS2P35442 1172 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 ACAA2P42765 397 aaKnown RBP16.03■□□□□ 0.16
COL9A1-201ENST00000320755 RPL13AP3Q6NVV1 102 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 ARMC6Q6NXE6 501 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 KIRREL2Q6UWL6 708 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 GPALPP1Q8IXQ4 340 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 IZUMO1Q8IYV9 350 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 PDCD1LG2Q9BQ51 273 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 JAM3Q9BX67 310 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 FOLH1BQ9HBA9 442 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 LRIT1Q9P2V4 623 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 GNG8Q9UK08 70 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 TP53BP1Q12888 1972 aaPredicted RBP16.03■□□□□ 0.16
COL9A1-201ENST00000320755 ANKRD34BA5PLL1 514 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 FZD7O75084 574 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 TNFP01375 233 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 IFNGP01579 166 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 LBX1P52954 281 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 BTG2P78543 158 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 FAPQ12884 760 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 RCBTB1Q8NDN9 531 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 SNX33Q8WV41 574 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 DNAJA3Q96EY1 480 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 DNAJB12Q9NXW2 375 aaKnown RBP16.03■□□□□ 0.16
COL9A1-201ENST00000320755 AK6Q9Y3D8 172 aaKnown RBP16.03■□□□□ 0.16
COL9A1-201ENST00000320755 OR10H1Q9Y4A9 318 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 B4DGG1 531 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 MCIDASD6RGH6 385 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 TFP02787 698 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 HOXC4P09017 264 aaPredicted RBP16.03■□□□□ 0.16
COL9A1-201ENST00000320755 CTSEP14091 401 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 MAGEB1P43366 347 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 ZNRF4Q8WWF5 429 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 THAP4Q8WY91 577 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 DACT3Q96B18 629 aaPredicted RBP16.03■□□□□ 0.16
COL9A1-201ENST00000320755 NMNAT3Q96T66 252 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 MARVELD1Q9BSK0 173 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 GPR174Q9BXC1 333 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 BRD7Q9NPI1 651 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 ING3Q9NXR8 418 aa16.03■□□□□ 0.16
COL9A1-201ENST00000320755 GMFGO60234 142 aa16.02■□□□□ 0.16
COL9A1-201ENST00000320755 NKX2-2O95096 273 aa16.02■□□□□ 0.16
COL9A1-201ENST00000320755 RAB3BP20337 219 aa16.02■□□□□ 0.16
COL9A1-201ENST00000320755 CTHRC1Q96CG8 243 aa16.02■□□□□ 0.16
COL9A1-201ENST00000320755 PGLYRP3Q96LB9 341 aa16.02■□□□□ 0.16
COL9A1-201ENST00000320755 ORAI3Q9BRQ5 295 aa16.02■□□□□ 0.16
COL9A1-201ENST00000320755 A0A1B0GVT2 93 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 TGFBR3LH3BV60 316 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 TNFRSF10CO14798 259 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 FMO6PO60774 539 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 TSC22D2O75157 780 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 SLC35E2P0CK97 266 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 SLC2A5P22732 501 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 MAP3K8P41279 467 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 ATP12AP54707 1039 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 HHEXQ03014 270 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 MRPL28Q13084 256 aaKnown RBP16.02■□□□□ 0.15
COL9A1-201ENST00000320755 OR4C3Q8NH37 302 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 ZC3HAV1LQ96H79 300 aaKnown RBP16.02■□□□□ 0.15
COL9A1-201ENST00000320755 NUDT15Q9NV35 164 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 ZNF346Q9UL40 294 aaKnown RBP16.02■□□□□ 0.15
COL9A1-201ENST00000320755 ATG2AQ2TAZ0 1938 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 MPDZO75970 2070 aa16.02■□□□□ 0.15
COL9A1-201ENST00000320755 C4orf47A7E2U8 309 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 AK1P00568 194 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 CCR4P51679 360 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 RRAS2P62070 204 aaPredicted RBP16.01■□□□□ 0.15
COL9A1-201ENST00000320755 NTRK2Q16620 822 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 ZCCHC12Q6PEW1 402 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 C10orf53Q8N6V4 93 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 RELTQ969Z4 430 aa16.01■□□□□ 0.15
COL9A1-201ENST00000320755 OR14A2Q96R54 314 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms