RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 Q6ZPA2 131 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 Q6ZTK2 550 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 GID4Q8IVV7 300 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ASCC1Q8N9N2 400 aaKnown RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 LYPD6BQ8NI32 183 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 FAM46AQ96IP4 442 aaKnown RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 CNPPD1Q9BV87 410 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 FGF22Q9HCT0 170 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 WARS2Q9UGM6 360 aaKnown RBP7.14□□□□□ -1.27
CNOT4-201ENST00000315544 RAB23Q9ULC3 237 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 ACSL5Q9ULC5 683 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 SLC5A6Q9Y289 635 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 GPR52Q9Y2T5 361 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 NPFFR2Q9Y5X5 522 aa7.14□□□□□ -1.27
CNOT4-201ENST00000315544 LOC105369274A0A096LPK9 316 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 LOC102723532A0A0G2JNH3 316 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 H7BY64 318 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 PEX12O00623 359 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CPSF4O95639 269 aaKnown RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 MPGP29372 298 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 PTGER1P34995 402 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 KLHL22Q53GT1 634 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF311Q5JNZ3 666 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 SLC27A4Q6P1M0 643 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 SFXN4Q6P4A7 337 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 PTCHD4Q6ZW05 846 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 OVCH1Q7RTY7 1134 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CDH24Q86UP0 819 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 NUDT13Q86X67 352 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 SLC38A6Q8IZM9 456 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 OR4N4Q8N0Y3 316 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 KCT2Q8NC54 265 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 SLC37A3Q8NCC5 494 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 TFGQ92734 400 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 GAL3ST3Q96A11 431 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 PRAP1Q96NZ9 151 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 DERL3Q96Q80 235 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 MACROD1Q9BQ69 325 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 C1QTNF7Q9BXJ2 289 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 FOXQ1Q9C009 403 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 PCBD2Q9H0N5 130 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 C11orf1Q9H5F2 150 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 UCK1Q9HA47 277 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 ABCB10Q9NRK6 738 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 DECR2Q9NUI1 292 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 IMP3Q9NV31 184 aaKnown RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 BABAM2Q9NXR7 383 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 B3GNT2Q9NY97 397 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 PLA2G2EQ9NZK7 142 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 TSR3Q9UJK0 312 aaKnown RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 SLC25A13Q9UJS0 675 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 PAIP2BQ9ULR5 123 aaKnown RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 HIF3AQ9Y2N7 669 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 ARHGAP21Q5T5U3 1957 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CDRT1O95170 752 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 FGF2P09038 288 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 ELFN1P0C7U0 828 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 VSIG10L2P0DP72 767 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CLDN2P57739 230 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CDC42P60953 191 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CFHR1Q03591 330 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 SPOUT1Q5T280 376 aaKnown RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CD276Q5ZPR3 534 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 Q6ZS52 159 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 TRMT11Q7Z4G4 463 aaKnown RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 OR52H1Q8NGJ2 320 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 STK35Q8TDR2 534 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 SNX33Q8WV41 574 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 MRPS31Q92665 395 aaKnown RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 FCRL4Q96PJ5 515 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 FAM117AQ9C073 453 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 FKRPQ9H9S5 495 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 GALNT9Q9HCQ5 603 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 ENOPH1Q9UHY7 261 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 FOXJ3Q9UPW0 622 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 OR14I1A6ND48 311 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 ZNF593O00488 134 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 GPR171O14626 319 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 EMC8O43402 210 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 TLX2O43763 284 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 FGF17O60258 216 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 PLGP00747 810 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CD8AP01732 235 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CD74P04233 296 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 GDI1P31150 447 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 CSF2RBP32927 897 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 SMSP52788 366 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 GTF2H3Q13889 308 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 TBRG1Q3YBR2 411 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 MANEAQ5SRI9 462 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 DCST1Q5T197 706 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 TNFAIP8L2Q6P589 184 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 THEM6Q8WUY1 208 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 FRMD6Q96NE9 622 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 MS4A4EQ96PG1 132 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 WDR13Q9H1Z4 485 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 MRPL39Q9NYK5 338 aaKnown RBP7.13□□□□□ -1.27
CNOT4-201ENST00000315544 SNX5Q9Y5X3 404 aa7.13□□□□□ -1.27
CNOT4-201ENST00000315544 A0A087WUJ7 227 aa7.12□□□□□ -1.27
CNOT4-201ENST00000315544 TBC1D3KA0A087X1G2 549 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms