RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 EXOSC6Q5RKV6 272 aaKnown RBP23.34■■□□□ 1.33
HOXB3-201ENST00000311626 LAMTOR1Q6IAA8 161 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 PHF21AQ96BD5 680 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 NUDT15Q9NV35 164 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 IER3IP1Q9Y5U9 82 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 TDRD6O60522 2096 aaKnown RBP23.34■■□□□ 1.33
HOXB3-201ENST00000311626 FAM171A2A8MVW0 826 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 CENPBD1B2RD01 187 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 ZNF10P21506 573 aaPredicted RBP23.34■■□□□ 1.33
HOXB3-201ENST00000311626 AHCYP23526 432 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 PTBP1P26599 531 aaKnown RBP eCLIP23.34■■□□□ 1.333e-7■■■■■ 51.9
HOXB3-201ENST00000311626 GRPRP30550 384 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 DGCR2P98153 550 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 SNAPC3Q92966 411 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 LYRM4Q9HD34 91 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 SATB2Q9UPW6 733 aa23.34■■□□□ 1.33
HOXB3-201ENST00000311626 AK6Q9Y3D8 172 aaKnown RBP23.34■■□□□ 1.33
HOXB3-201ENST00000311626 IDSB3KWA1 339 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 GALR3O60755 368 aaPredicted RBP23.33■■□□□ 1.33
HOXB3-201ENST00000311626 SOX30O94993 753 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 ATF1P18846 271 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 NPR2P20594 1047 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 ACAA2P42765 397 aaKnown RBP23.33■■□□□ 1.33
HOXB3-201ENST00000311626 ATP12AP54707 1039 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 NTRK2Q16620 822 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 PLA1AQ53H76 456 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 AKAP1Q92667 903 aaKnown RBP eCLIP23.33■■□□□ 1.33
HOXB3-201ENST00000311626 GABRG3Q99928 467 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 PDCD1LG2Q9BQ51 273 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 BEX1Q9HBH7 125 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 C1QBP02746 253 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 PSG6Q00889 435 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 BAHD1Q8TBE0 780 aaPredicted RBP23.33■■□□□ 1.33
HOXB3-201ENST00000311626 ZPLD1Q8TCW7 415 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 FAM131CQ96AQ9 280 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 MRGPRX1Q96LB2 322 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 UBL7Q96S82 380 aaPredicted RBP23.33■■□□□ 1.33
HOXB3-201ENST00000311626 STACQ99469 402 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 GPR174Q9BXC1 333 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 HCN3Q9P1Z3 774 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 PCOLCE2Q9UKZ9 415 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 ZNF346Q9UL40 294 aaKnown RBP23.33■■□□□ 1.33
HOXB3-201ENST00000311626 CACNG2Q9Y698 323 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 SPACA6W5XKT8 324 aa23.33■■□□□ 1.33
HOXB3-201ENST00000311626 A0A087WV48 116 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 A0A087WV62 115 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 MCIDASD6RGH6 385 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 RAB3BP20337 219 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 DRD5P21918 477 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 GALP22466 123 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 MRPL28Q13084 256 aaKnown RBP23.32■■□□□ 1.32
HOXB3-201ENST00000311626 C1orf61Q13536 156 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 DMKNQ6E0U4 476 aaPredicted RBP23.32■■□□□ 1.32
HOXB3-201ENST00000311626 Q6ZSR6 202 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 TIGD4Q8IY51 512 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 CCDC3Q9BQI4 270 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 DNAJB12Q9NXW2 375 aaKnown RBP23.32■■□□□ 1.32
HOXB3-201ENST00000311626 MRPL15Q9P015 296 aaKnown RBP23.32■■□□□ 1.32
HOXB3-201ENST00000311626 CPNE7Q9UBL6 633 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 ST6GALNAC2Q9UJ37 374 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 NCKAP1Q9Y2A7 1128 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 OR2B3O76000 313 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 PEPDP12955 493 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 MAP3K8P41279 467 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 KIRREL2Q6UWL6 708 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 THAP4Q8WY91 577 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 GCDHQ92947 438 aaPredicted RBP23.32■■□□□ 1.32
HOXB3-201ENST00000311626 ELSPBP1Q96BH3 223 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 SPACA7Q96KW9 195 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 CITED4Q96RK1 184 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 BRD7Q9NPI1 651 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 TMEM5Q9Y2B1 443 aa23.32■■□□□ 1.32
HOXB3-201ENST00000311626 TGFBR3LH3BV60 316 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 CHP2O43745 196 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 CCR6P51684 374 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 MAB21L1Q13394 359 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 GSDMCQ9BYG8 508 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 CACNA1IQ9P0X4 2223 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 FABP7O15540 132 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 MAT1AQ00266 395 aaKnown RBP23.31■■□□□ 1.32
HOXB3-201ENST00000311626 SLC36A2Q495M3 483 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 ZNF613Q6PF04 617 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 RTL4Q6ZR62 310 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 PXKQ7Z7A4 578 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 GPALPP1Q8IXQ4 340 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 BEST4Q8NFU0 473 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 CREB3L1Q96BA8 519 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 PELI1Q96FA3 418 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 OR14A2Q96R54 314 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 GNG8Q9UK08 70 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 TICRRQ7Z2Z1 1910 aa23.31■■□□□ 1.32
HOXB3-201ENST00000311626 GIFP27352 417 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 RBMS1P29558 406 aaKnown RBP23.3■■□□□ 1.32
HOXB3-201ENST00000311626 CCDC58Q4VC31 144 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 GATSQ8NAP1 163 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 OR13H1Q8NG92 308 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 MS4A3Q96HJ5 214 aa23.3■■□□□ 1.32
HOXB3-201ENST00000311626 A0A0A6YYC8 382 aaPredicted RBP23.3■■□□□ 1.32
HOXB3-201ENST00000311626 I3L1I5 382 aaPredicted RBP23.3■■□□□ 1.32
HOXB3-201ENST00000311626 SELENOFO60613 162 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms