RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ELP4Q96EB1 424 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 LRIG1Q96JA1 1093 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 PELI2Q9HAT8 420 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 SLC6A20Q9NP91 592 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 MED11Q9P086 117 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 GLS2Q9UI32 602 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 SC5DO75845 299 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 NT5EP21589 574 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 MPIP34949 423 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 AP3S2P59780 193 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 RAB33AQ14088 237 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF169Q14929 603 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-202ENST00000310645 ELP2Q6IA86 826 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 TCEAL8Q8IYN2 117 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 CDK20Q8IZL9 346 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF614Q8N883 585 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 FAM98AQ8NCA5 519 aaKnown RBP13.57□□□□□ -0.24
COL6A2-202ENST00000310645 FAM71CQ8NEG0 241 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 THEM6Q8WUY1 208 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 TMEM239Q8WW34 195 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 NPAS1Q99742 590 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 JAM3Q9BX67 310 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 GPR174Q9BXC1 333 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 DPEP2Q9H4A9 486 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 HCFC1R1Q9NWW0 138 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 CPNE7Q9UBL6 633 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 PYCARD-AS1I3L0S3 204 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 AIPO00170 330 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 GOSR2O14653 212 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 GNB5O14775 395 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 SCAMP1O15126 338 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 GSTZ1O43708 216 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-202ENST00000310645 SERPINA3P01011 423 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 GABRA1P14867 456 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 GRPRP30550 384 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF836Q6ZNA1 936 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 IRF7Q92985 503 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 PELI1Q96FA3 418 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 ANKRD19PQ9H560 264 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 EVA1AQ9H8M9 152 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 CMC2Q9NRP2 79 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 HPF1Q9NWY4 346 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 CLDND1Q9NY35 253 aa13.57□□□□□ -0.24
COL6A2-202ENST00000310645 AKAP7Q9P0M2 348 aaPredicted RBP13.57□□□□□ -0.24
COL6A2-202ENST00000310645 MANSC4A6NHS7 340 aaPredicted RBP13.56□□□□□ -0.24
COL6A2-202ENST00000310645 IDSB3KWA1 339 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 GALR3O60755 368 aaPredicted RBP13.56□□□□□ -0.24
COL6A2-202ENST00000310645 ASGR2P07307 311 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 FGF2P09038 288 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 C6P13671 934 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 RPS15P62841 145 aaKnown RBP13.56□□□□□ -0.24
COL6A2-202ENST00000310645 LNX2Q8N448 690 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 OR4K13Q8NH42 304 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 SYNPRQ8TBG9 265 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 PXYLP1Q8TE99 480 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 NR4A3Q92570 626 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 BPIFA2Q96DR5 249 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 LRRC46Q96FV0 321 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 FERD3LQ96RJ6 166 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 SLC38A3Q99624 504 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF559Q9BR84 538 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 FN3KQ9H479 309 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 EPHX3Q9H6B9 360 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 CALML5Q9NZT1 146 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 ST6GALNAC2Q9UJ37 374 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 MRTO4Q9UKD2 239 aaKnown RBP13.56□□□□□ -0.24
COL6A2-202ENST00000310645 WNT6Q9Y6F9 365 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 UBE2QL1A1L167 161 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 D6RAR5 112 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 PPP3CBP16298 524 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 PRKAR1BP31321 381 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 HYAL4Q2M3T9 481 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 STPG1Q5TH74 334 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 FAM111BQ6SJ93 734 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 FRRS1Q6ZNA5 592 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.56□□□□□ -0.24
COL6A2-202ENST00000310645 SDR9C7Q8NEX9 313 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 OR1S1Q8NH92 325 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 PRDM9Q9NQV7 894 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 TAS2R5Q9NYW4 299 aa13.56□□□□□ -0.24
COL6A2-202ENST00000310645 TRAV1-2A0A0B4J238 106 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 A0A1W2PQ45 241 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-202ENST00000310645 A0A1W2PQY0 241 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 MEIS3P1A6NDR6 274 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 RCBTB2O95199 551 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 ECDO95905 644 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-202ENST00000310645 RLN2P04090 185 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 HIST1H2ABP04908 130 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 HIST1H1TP22492 207 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-202ENST00000310645 H2BFSP57053 126 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 ERVK-25P63136 954 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SHEQ5VZ18 495 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 TMEM64Q6YI46 380 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 HIST3H2AQ7L7L0 130 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 SPICQ8N5J4 248 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 LINC01555Q8NAE3 123 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 TNFAIP8L1Q8WVP5 186 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 HIST1H2ACQ93077 130 aa13.55□□□□□ -0.24
COL6A2-202ENST00000310645 ZNF707Q96C28 371 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-202ENST00000310645 PAWRQ96IZ0 340 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms