RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SETD9Q8NE22 299 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 B4GALNT2Q8NHY0 566 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 BRIX1Q8TDN6 353 aaKnown RBP6.34□□□□□ -1.4
PTCD2-201ENST00000308077 GPR119Q8TDV5 335 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 DNAJA4Q8WW22 397 aaPredicted RBP6.34□□□□□ -1.4
PTCD2-201ENST00000308077 PSMF1Q92530 271 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 SGCDQ92629 289 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 HS6ST2Q96MM7 605 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 APOL4Q9BPW4 351 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 TMUB1Q9BVT8 246 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 ADAM19Q9H013 955 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 SH2D2AQ9NP31 389 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 RASSF1Q9NS23 344 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF226Q9NYT6 803 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 YARS2Q9Y2Z4 477 aaKnown RBP6.34□□□□□ -1.4
PTCD2-201ENST00000308077 MED31Q9Y3C7 131 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 MSRB2Q9Y3D2 182 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 HSPE1-MOB4S4R3N1 261 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 SLC1A7O00341 560 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 DXOO77932 396 aaKnown RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 SERPINA7P05543 415 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 TFAP2AP05549 437 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ICAM2P13598 275 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 LIFP15018 202 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ENDOUP21128 410 aaKnown RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ITPKBP27987 946 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 TACR3P29371 465 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 FMO3P31513 532 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 CASP3P42574 277 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 SLC1A3P43003 542 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 SSR4P51571 173 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 RPS6KA3P51812 740 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 CDK5Q00535 292 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 CBFBQ13951 182 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 INPP5JQ15735 1006 aaPredicted RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 SMN1Q16637 294 aaKnown RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 KCTD21Q4G0X4 260 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ATP1A1-AS1Q5TC04 95 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 C12orf73Q69YU5 71 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ACSM5Q6NUN0 579 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF620Q6ZNG0 422 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 TMPRSS11FQ6ZWK6 438 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 MISPQ8IVT2 679 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF563Q8TA94 476 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ASB15Q8WXK1 588 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 HDAC2Q92769 488 aaKnown RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 BPIFA2Q96DR5 249 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 NPAS1Q99742 590 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 GPN2Q9H9Y4 310 aaPredicted RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 BATF3Q9NR55 127 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 KLRF1Q9NZS2 232 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 SELENONQ9NZV5 590 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 MED11Q9P086 117 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 WIF1Q9Y5W5 379 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ANKUB1A6NFN9 424 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 UNC119BA6NIH7 251 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ELOA3DA6NLF2 546 aaPredicted RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 LRRN3E7EW58 273 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 XPNPEP2O43895 674 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 CDC40O60508 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 NUDT14O95848 222 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 CCL3P10147 92 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 LIPCP11150 499 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ATP6V1B1P15313 513 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 PGCP20142 388 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 CRHBPP24387 322 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 EGR4Q05215 589 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 CRYZQ08257 329 aaKnown RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 C17orf67Q0P5P2 114 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 FHL1Q13642 323 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 GINS1Q14691 196 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 QPRTQ15274 297 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ELOA3BQ3SY89 546 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 RBM48Q5RL73 367 aaKnown RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 PRAMEF20Q5VT98 475 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 BROXQ5VW32 411 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 OPN5Q6U736 354 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 SLC46A3Q7Z3Q1 461 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 VASH2Q86V25 355 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 TSPAN14Q8NG11 270 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ELOA3Q8NG57 546 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 OR13C2Q8NGS9 318 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 RHOXF1Q8NHV9 184 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF566Q969W8 418 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 NTNG2Q96CW9 530 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 THOC3Q96J01 351 aaKnown RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 RHNO1Q9BSD3 238 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 YTHDF1Q9BYJ9 559 aaKnown RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ENKD1Q9H0I2 346 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 ADNPQ9H2P0 1102 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 METTL7AQ9H8H3 244 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 SLC25A19Q9HC21 320 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 PROK2Q9HC23 129 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 KRCC1Q9NPI7 259 aaPredicted RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 PAK1IP1Q9NWT1 392 aaPredicted RBP6.33□□□□□ -1.4
PTCD2-201ENST00000308077 TAS2R10Q9NYW0 307 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 IL20Q9NYY1 176 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 IL20RAQ9UHF4 553 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 OSGIN1Q9UJX0 560 aa6.33□□□□□ -1.4
PTCD2-201ENST00000308077 TMEM5Q9Y2B1 443 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms