RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PODNL1Q6PEZ8 512 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 MFSD6LQ8IWD5 586 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 GATSQ8NAP1 163 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 NKX3-1Q99801 234 aaPredicted RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 PAPOLGQ9BWT3 736 aaKnown RBP7.16□□□□□ -1.26
SF3B3-201ENST00000302516 SEMA4CQ9C0C4 833 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 FBXO8Q9NRD0 319 aa7.16□□□□□ -1.26
SF3B3-201ENST00000302516 ANKRD30BLA7E2S9 258 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 E9PI62 339 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 MPIG6BO95866 241 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 NR0B1P51843 470 aaKnown RBP7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CLDN6P56747 220 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 HNRNPKP61978 463 aaKnown RBP eCLIP7.15□□□□□ -1.26
SF3B3-201ENST00000302516 TEKQ02763 1124 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 ECH1Q13011 328 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 TNK1Q13470 666 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 PIN1Q13526 163 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-201ENST00000302516 STEAP3Q658P3 488 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CRTC1Q6UUV9 634 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 LYPD4Q6UWN0 246 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF551Q7Z340 670 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-201ENST00000302516 TMPRSS9Q7Z410 1059 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 GRASPQ7Z6J2 395 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-201ENST00000302516 OR2L13Q8N349 312 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SCAMP4Q969E2 229 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 GABARAPL1Q9H0R8 117 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 EXOSC3Q9NQT5 275 aaKnown RBP7.15□□□□□ -1.26
SF3B3-201ENST00000302516 A6NLC8 198 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SCAMP1O15126 338 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 RHOP08100 348 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 ARAFP10398 606 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 ILKQ13418 452 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 BCL7AQ4VC05 210 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SFXN4Q6P4A7 337 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 BRICD5Q6PL45 260 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CLEC14AQ86T13 490 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 MISPQ8IVT2 679 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 ZFP82Q8N141 532 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CPT1CQ8TCG5 803 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SCARB1Q8WTV0 552 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SLAMF9Q96A28 289 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SLC25A46Q96AG3 418 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CHRDQ9H2X0 955 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 OR52D1Q9H346 318 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 IL26Q9NPH9 171 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 RARRES3Q9UL19 164 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CA5BQ9Y2D0 317 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 OR6C65A6NJZ3 312 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 GABRR3A8MPY1 467 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF705GA8MUZ8 300 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SYT5O00445 386 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 MSTNO14793 375 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 EDN1P05305 212 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 AOAHP28039 575 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 HTR1FP30939 366 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CST6Q15828 149 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 ST6GALNAC5Q9BVH7 336 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 COPS3Q9UNS2 423 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SRPK3Q9UPE1 567 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 A8MU76 341 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF217O75362 1048 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 FUT1P19526 365 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 RAB6AP20340 208 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 S100A11P31949 105 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SERPINF1P36955 418 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 FXYD4P59646 89 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 NXNL2Q5VZ03 156 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 OR10K2Q6IF99 312 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SMIM15Q7Z3B0 74 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 TOMM40LQ969M1 308 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SGK3Q96BR1 496 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 NECTIN4Q96NY8 510 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 TMEM38AQ9H6F2 299 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SCPEP1Q9HB40 452 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CUTCQ9NTM9 273 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 EHFQ9NZC4 300 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SURF4O15260 269 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 B4GAT1O43505 415 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 HCRTO43612 131 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SERPINA7P05543 415 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CPMP14384 443 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 EPHA1P21709 976 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 TAZQ16635 292 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 ENTPD8Q5MY95 495 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 FIGLAQ6QHK4 219 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 GPR26Q8NDV2 337 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 OR10K1Q8NGX5 313 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CPPED1Q9BRF8 314 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-201ENST00000302516 DDX31Q9H8H2 851 aaKnown RBP7.15□□□□□ -1.26
SF3B3-201ENST00000302516 SLC6A20Q9NP91 592 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 CSNK1G3Q9Y6M4 447 aa7.15□□□□□ -1.26
SF3B3-201ENST00000302516 FZD9O00144 591 aa7.15□□□□□ -1.27
SF3B3-201ENST00000302516 ADAM12O43184 909 aa7.15□□□□□ -1.27
SF3B3-201ENST00000302516 FADS1O60427 444 aa7.15□□□□□ -1.27
SF3B3-201ENST00000302516 STK17BO94768 372 aa7.15□□□□□ -1.27
SF3B3-201ENST00000302516 CSF2RAP15509 400 aa7.15□□□□□ -1.27
SF3B3-201ENST00000302516 NAGAP17050 411 aa7.15□□□□□ -1.27
SF3B3-201ENST00000302516 CR2P20023 1033 aa7.15□□□□□ -1.27
SF3B3-201ENST00000302516 LANCL3Q6ZV70 420 aa7.15□□□□□ -1.27
SF3B3-201ENST00000302516 MBOAT2Q6ZWT7 520 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms