RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 RRAS2P62070 204 aaPredicted RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 SNTA1Q13424 505 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 OR5M10Q6IEU7 315 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 SFXN4Q6P4A7 337 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 ZNF322Q6U7Q0 402 aaPredicted RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 SHISA6Q6ZSJ9 500 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 PLCZ1Q86YW0 608 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 NAXEQ8NCW5 288 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 TMIEQ8NEW7 156 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 RLN3Q8WXF3 142 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 GPN1Q9HCN4 374 aaPredicted RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 APOBEC3BQ9UH17 382 aaKnown RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 UNC13CQ8NB66 2214 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 MAN2B1O00754 1011 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 DVL2O14641 736 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 NARSO43776 548 aaKnown RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 ITGA10O75578 1167 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 DBIP07108 87 aaKnown RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 PCBP3P57721 371 aaKnown RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 E2F1Q01094 437 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 TOMM20Q15388 145 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 TAF13Q15543 124 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 Q5BKY6 102 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 OLFML2AQ68BL7 652 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 ARSKQ6UWY0 536 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 TTLL10Q6ZVT0 673 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 SLITRK4Q8IW52 837 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 SIRT6Q8N6T7 355 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 OR4Q3Q8NH05 313 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 RIT1Q92963 219 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 ELMOD3Q96FG2 381 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 COMMD4Q9H0A8 199 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 METTL17Q9H7H0 456 aaPredicted RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 PRDM9Q9NQV7 894 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 FBXO34Q9NWN3 711 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 AKAP7Q9P0M2 348 aaPredicted RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 ZNF780AO75290 641 aaPredicted RBP13.03□□□□□ -0.32
SDC2-201ENST00000302190 SPARCP09486 303 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 LIMS3P0CW19 117 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 LIMS4P0CW20 117 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 OR8G3PP0DMU2 310 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 VAMP1P23763 118 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 DEFA5Q01523 94 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 GPR176Q14439 515 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 OCLNQ16625 522 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 ATCAYQ86WG3 371 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 GPALPP1Q8IXQ4 340 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 ABHD4Q8TB40 342 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 CASTOR1Q8WTX7 329 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 MOAP1Q96BY2 351 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 TSSK2Q96PF2 358 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 ARL6Q9H0F7 186 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 MED12Q93074 2177 aa13.03□□□□□ -0.32
SDC2-201ENST00000302190 NPC1O15118 1278 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 KCNJ13O60928 360 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 IFNA7P01567 189 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 MAP3K8P41279 467 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 FOXK2Q01167 660 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 PDE7AQ13946 482 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 IGSF11Q5DX21 431 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 USP53Q70EK8 1073 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 SIAH3Q8IW03 269 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 FOXRED2Q8IWF2 684 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 WDR92Q96MX6 357 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 SLC38A1Q9H2H9 487 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 FOLH1BQ9HBA9 442 aa13.02□□□□□ -0.32
SDC2-201ENST00000302190 TPRP12270 2363 aaKnown RBP13.02□□□□□ -0.33
SDC2-201ENST00000302190 H0YGG7 62 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 SDC3O75056 442 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 AP3S2P59780 193 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 CTXN1P60606 82 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 ARF3P61204 181 aaPredicted RBP13.02□□□□□ -0.33
SDC2-201ENST00000302190 ELOAQ14241 798 aaKnown RBP13.02□□□□□ -0.33
SDC2-201ENST00000302190 ZNF79Q15937 498 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 FAM180AQ6UWF9 173 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 TTC9Q92623 222 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 CNN2Q99439 309 aaKnown RBP13.02□□□□□ -0.33
SDC2-201ENST00000302190 EXO5Q9H790 373 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 ZMAT3Q9HA38 289 aaKnown RBP13.02□□□□□ -0.33
SDC2-201ENST00000302190 SIRT3Q9NTG7 399 aaPredicted RBP13.02□□□□□ -0.33
SDC2-201ENST00000302190 ACOXLQ9NUZ1 547 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 GRHPRQ9UBQ7 328 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 HNRNPA1P09651 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
SDC2-201ENST00000302190 UCHL1P09936 223 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 CPEP16870 476 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 C5AR1P21730 350 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 RPS15AP62244 130 aaKnown RBP13.02□□□□□ -0.33
SDC2-201ENST00000302190 DGCR2P98153 550 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 MFSD12Q6NUT3 480 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 ZNF248Q8NDW4 579 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 GIMAP1Q8WWP7 306 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 SGTBQ96EQ0 304 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 ZFYVE21Q9BQ24 234 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 TAPBPLQ9BX59 468 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 SCPEP1Q9HB40 452 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 C20orf141Q9NUB4 165 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 CLDND1Q9NY35 253 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 REV1Q9UBZ9 1251 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 ERVK-19Q9WJR5 959 aa13.02□□□□□ -0.33
SDC2-201ENST00000302190 CEP250Q9BV73 2442 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms