RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 OR5L2Q8NGL0 311 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 OR5M3Q8NGP4 307 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 RFKQ969G6 155 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 TMEM43Q9BTV4 400 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 LOC102723996A0A087X1L8 192 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 SOCS6O14544 535 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 CBFA2T3O75081 653 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 CSO75390 466 aaKnown RBP20.33■□□□□ 0.84
SMAD1-201ENST00000302085 KLF7O75840 302 aaPredicted RBP20.33■□□□□ 0.84
SMAD1-201ENST00000302085 ITPKBP27987 946 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 VBP1P61758 197 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 EFR3AQ14156 821 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 C3orf38Q5JPI3 329 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 FCRLBQ6BAA4 426 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 PLBD1Q6P4A8 553 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 NAXDQ8IW45 347 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 PROKR2Q8NFJ6 384 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 OR5W2Q8NH69 310 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 FN3KQ9H479 309 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 MED20Q9H944 212 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 CMC2Q9NRP2 79 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 LOXL2Q9Y4K0 774 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 FRYLO94915 3013 aa20.33■□□□□ 0.84
SMAD1-201ENST00000302085 RALGAPA1Q6GYQ0 2036 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 IRGMA1A4Y4 181 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 ZFAND5O76080 213 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 BCL10O95999 233 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 ZNF806P0C7X5 589 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 GADD45AP24522 165 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 HTR1FP30939 366 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 SLC6A6P31641 620 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 EGR4Q05215 589 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 PCOLCEQ15113 449 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 DUSP19Q8WTR2 217 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 PTP4A1Q93096 173 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 HGDQ93099 445 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 HCAR1Q9BXC0 346 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 AKAP7Q9P0M2 348 aaPredicted RBP20.32■□□□□ 0.84
SMAD1-201ENST00000302085 H2AFY2Q9P0M6 372 aaPredicted RBP20.32■□□□□ 0.84
SMAD1-201ENST00000302085 BAIAP2Q9UQB8 552 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 PTRH2Q9Y3E5 179 aaKnown RBP20.32■□□□□ 0.84
SMAD1-201ENST00000302085 C9J4A7 227 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 SLC22A1O15245 554 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 SLC9A3P48764 834 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 CLDN6P56747 220 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 NCS1P62166 190 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 SHFQ7M4L6 423 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 SLC43A2Q8N370 569 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 OTULINQ96BN8 352 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 OPALINQ96PE5 141 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 MND1Q9BWT6 205 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 C12orf10Q9HB07 376 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 ZNF337Q9Y3M9 751 aa20.32■□□□□ 0.84
SMAD1-201ENST00000302085 WDR87Q6ZQQ6 2873 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 PMS2P1A4D2B8 440 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 HTR3EA5X5Y0 456 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 FOXD2O60548 495 aaPredicted RBP20.31■□□□□ 0.84
SMAD1-201ENST00000302085 NDUFB2O95178 105 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 WISP1O95388 367 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 IGF2P01344 180 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 PEPDP12955 493 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 SPHARQ15513 63 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 TSTQ16762 297 aaKnown RBP20.31■□□□□ 0.84
SMAD1-201ENST00000302085 NDNFQ8TB73 568 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 MYOTQ9UBF9 498 aa20.31■□□□□ 0.84
SMAD1-201ENST00000302085 EXOGQ9Y2C4 368 aaKnown RBP20.31■□□□□ 0.84
SMAD1-201ENST00000302085 NAGAP17050 411 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 P2RX1P51575 399 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 INSM1Q01101 510 aaPredicted RBP20.3■□□□□ 0.84
SMAD1-201ENST00000302085 DBPQ10586 325 aaPredicted RBP20.3■□□□□ 0.84
SMAD1-201ENST00000302085 DCAF12Q5T6F0 453 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 C19orf48Q6RUI8 117 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 GPR119Q8TDV5 335 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 CHRNA9Q9UGM1 479 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 OSGIN1Q9UJX0 560 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 WDFY4Q6ZS81 3184 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 MCIDASD6RGH6 385 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 AIREO43918 545 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 HK1P19367 917 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 PGCP20142 388 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 TGFBR1P36897 503 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 LTBQ06643 244 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 ITGADQ13349 1161 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 SSX1Q16384 188 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 ZNF74Q16587 644 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 NIPAL3Q6P499 406 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 LYPD8Q6UX82 237 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 MEPCEQ7L2J0 689 aaKnown RBP20.3■□□□□ 0.84
SMAD1-201ENST00000302085 IGFN1Q86VF2 1251 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 OR4F15Q8NGB8 312 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 B4GALNT2Q8NHY0 566 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 ELP5Q8TE02 316 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 LIPHQ8WWY8 451 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 NACC2Q96BF6 587 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 TIMMDC1Q9NPL8 285 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 PCNX3Q9H6A9 2034 aa20.3■□□□□ 0.84
SMAD1-201ENST00000302085 C2orf72A6NCS6 295 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 NUDT14O95848 222 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 CBFBQ13951 182 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 GXYLT1Q4G148 440 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms