RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 NDUFAF6Q330K2 333 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 ARMC4Q5T2S8 1044 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 WBP2NLQ6ICG8 309 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 LCN10Q6JVE6 187 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 THSD4Q6ZMP0 1018 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 SHFQ7M4L6 423 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 SLC29A4Q7RTT9 530 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 BBS1Q8NFJ9 593 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 TP53INP1Q96A56 240 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 SGTBQ96EQ0 304 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 DACH2Q96NX9 599 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 PHOX2BQ99453 314 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 SPSB2Q99619 263 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 WDR77Q9BQA1 342 aaPredicted RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 C6orf62Q9GZU0 229 aaPredicted RBP8.38□□□□□ -1.07
PDPN-201ENST00000294489 WWTR1Q9GZV5 400 aa8.38□□□□□ -1.07
PDPN-201ENST00000294489 SAGE2PA6NJ88 616 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 GNB5O14775 395 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 CPNE3O75131 537 aaKnown RBP8.37□□□□□ -1.07
PDPN-201ENST00000294489 REM1O75628 298 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 IFNGP01579 166 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 HK1P19367 917 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 CCR4P51679 360 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 TMED1Q13445 227 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 DOC2BQ14184 412 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 PHF19Q5T6S3 580 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 OR2G6Q5TZ20 316 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 LANCL3Q6ZV70 420 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 MEPCEQ7L2J0 689 aaKnown RBP8.37□□□□□ -1.07
PDPN-201ENST00000294489 IGFN1Q86VF2 1251 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 KLHL36Q8N4N3 616 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 GATSQ8NAP1 163 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 OR4F15Q8NGB8 312 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 GATAD2BQ8WXI9 593 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 UFD1Q92890 307 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 TNFRSF13CQ96RJ3 184 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 ADOQ96SZ5 270 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 SECISBP2Q96T21 854 aaKnown RBP8.37□□□□□ -1.07
PDPN-201ENST00000294489 SLC19A3Q9BZV2 496 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 ENKD1Q9H0I2 346 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 SYNDIG1Q9H7V2 258 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 A0A1W2PQD3 144 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 HTR3EA5X5Y0 456 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 SLC22A31A6NKX4 558 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 SOCS6O14544 535 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 ZNF264O43296 627 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 ALOX12BO75342 701 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 LIMS3P0CW19 117 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 LIMS4P0CW20 117 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 PNMTP11086 282 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 PEPDP12955 493 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 SLC9A3P48764 834 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 ITGADQ13349 1161 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 KLHL12Q53G59 568 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 CDCP2Q5VXM1 449 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 NIPAL3Q6P499 406 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 ARHGAP11AQ6P4F7 1023 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 LHFPL3Q86UP9 236 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 APCDD1LQ8NCL9 501 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 OR51G2Q8NGK0 314 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 OR8K3Q8NH51 312 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 RNF138Q8WVD3 245 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 CTRCQ99895 268 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 ICAM5Q9UMF0 924 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 RALGAPA1Q6GYQ0 2036 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 VCANP13611 3396 aa8.37□□□□□ -1.07
PDPN-201ENST00000294489 LOC102723996A0A087X1L8 192 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ELOA3DA6NLF2 546 aaPredicted RBP8.36□□□□□ -1.07
PDPN-201ENST00000294489 IDSB3KWA1 339 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ADAM10O14672 748 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 NDUFB2O95178 105 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 PPP1R3DO95685 299 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 IGF2P01344 180 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 IGHA1P01876 353 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 CRYBB2P43320 205 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 NR0B1P51843 470 aaKnown RBP8.36□□□□□ -1.07
PDPN-201ENST00000294489 RAB15P59190 212 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 RPS7P62081 194 aaKnown RBP8.36□□□□□ -1.07
PDPN-201ENST00000294489 CD226Q15762 336 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ELOA3BQ3SY89 546 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 SUMF1Q8NBK3 374 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ELOA3Q8NG57 546 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 C3orf49Q96BT1 292 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ARHGAP9Q9BRR9 750 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 CDADC1Q9BWV3 514 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 ASPNQ9BXN1 380 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 NXF2Q9GZY0 626 aaKnown RBP8.36□□□□□ -1.07
PDPN-201ENST00000294489 SIAEQ9HAT2 523 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 A0A1W2PQ72 361 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 MEN1O00255 615 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 WWP2O00308 870 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 SLC30A4O14863 429 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 AKAP8O43823 692 aaKnown RBP8.36□□□□□ -1.07
PDPN-201ENST00000294489 BMP4P12644 408 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 SLC16A1P53985 500 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 PLCXD2Q0VAA5 305 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 SKP2Q13309 424 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 TPBGQ13641 420 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 RGS21Q2M5E4 152 aa8.36□□□□□ -1.07
PDPN-201ENST00000294489 TMPRSS11AQ6ZMR5 421 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms