RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TIAF1O95411 115 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 NID1P14543 1247 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 RPS4Y1P22090 263 aaKnown RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 GALP22466 123 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 PPICP45877 212 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 CLDN6P56747 220 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 SLC37A1P57057 533 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 FLYWCH1Q4VC44 716 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 AADACL4Q5VUY2 407 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF385CQ66K41 422 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 PAQR6Q6TCH4 344 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 DHRS13Q6UX07 377 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 SLC38A9Q8NBW4 561 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF485Q8NCK3 441 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 SLC2A12Q8TD20 617 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 ADAMTS14Q8WXS8 1223 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 ARHGAP9Q9BRR9 750 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 QRSL1Q9H0R6 528 aaKnown RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 WDR54Q9H977 334 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 SLC22A11Q9NSA0 550 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 SNTG1Q9NSN8 517 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 SLC39A1Q9NY26 324 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 CTSFQ9UBX1 484 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 C19orf25Q9UFG5 118 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 GPN3Q9UHW5 284 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 CBLCQ9ULV8 474 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 EXOGQ9Y2C4 368 aaKnown RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 GSTK1Q9Y2Q3 226 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 GPR55Q9Y2T6 319 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 SF3B6Q9Y3B4 125 aaKnown RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 SPIN1Q9Y657 262 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-201ENST00000292476 CDH10Q9Y6N8 788 aa15.44■□□□□ 0.06
CPSF4-201ENST00000292476 NINQ8N4C6 2090 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 SCN2AQ99250 2005 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 NUP210LQ5VU65 1888 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 VSTM2BA6NLU5 285 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 CPSF4LA6NMK7 179 aaKnown RBP15.43■□□□□ 0.06
CPSF4-201ENST00000292476 SURF4O15260 269 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 ZIC2O95409 532 aaPredicted RBP15.43■□□□□ 0.06
CPSF4-201ENST00000292476 IGKV3-11P04433 115 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 SPNP16150 400 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 LCN1P31025 176 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 TPTEP56180 551 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 PGGHGQ32M88 737 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 HLA-DQA1Q5Y7H0 255 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 XKRXQ6PP77 449 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF620Q6ZNG0 422 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 OR52N1Q8NH53 320 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 SLC41A3Q96GZ6 507 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 MCHR1Q99705 422 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 SCNM1Q9BWG6 230 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 OR8D2Q9GZM6 311 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 SRRQ9GZT4 340 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 HOXD1Q9GZZ0 328 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 MOV10Q9HCE1 1003 aaKnown RBP15.43■□□□□ 0.06
CPSF4-201ENST00000292476 KLK13Q9UKR3 277 aa15.43■□□□□ 0.06
CPSF4-201ENST00000292476 TRDV1A0A1B0GX56 115 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 IDSB3KWA1 339 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 HRKO00198 91 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 RGS5O15539 181 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 SEC14L5O43304 696 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 FMO6PO60774 539 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 DKK1O94907 266 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 CDRT1O95170 752 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 IGHA1P01876 353 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 ATXN8OSP0DMR3 200 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 DRD5P21918 477 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 HTR1FP30939 366 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 CASP3P42574 277 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 EMP2P54851 167 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 CDH11P55287 796 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.42■□□□□ 0.06
CPSF4-201ENST00000292476 CCNJQ5T5M9 372 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 DCAF12Q5T6F0 453 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 NXNL2Q5VZ03 156 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 FIGNL1Q6PIW4 674 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 SLC29A4Q7RTT9 530 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 GDF7Q7Z4P5 450 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 RANBP3LQ86VV4 465 aaPredicted RBP15.42■□□□□ 0.06
CPSF4-201ENST00000292476 RNF113BQ8IZP6 322 aaKnown RBP15.42■□□□□ 0.06
CPSF4-201ENST00000292476 GDPD1Q8N9F7 314 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 PSD4Q8NDX1 1056 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 OR1N1Q8NGS0 311 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 ZNF721Q8TF20 911 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 SLC35B4Q969S0 331 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 FAM46AQ96IP4 442 aaKnown RBP15.42■□□□□ 0.06
CPSF4-201ENST00000292476 APMAPQ9HDC9 416 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 TBC1D24Q9ULP9 559 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 WASF3Q9UPY6 502 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 PTPRBP23467 1997 aa15.42■□□□□ 0.06
CPSF4-201ENST00000292476 GXYLT2A0PJZ3 443 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 FRG2CA6NGY1 282 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 C9J4A7 227 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 ALOX12BO75342 701 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 DDAH2O95865 285 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 LIMS3P0CW19 117 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 LIMS4P0CW20 117 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CT45A8P0DMV1 189 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 CT45A9P0DMV2 189 aa15.41■□□□□ 0.06
CPSF4-201ENST00000292476 SLC1A3P43003 542 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms