RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 PLD2O14939 933 aa20.39■□□□□ 0.85
SIX3-201ENST00000260653 ADORA3P0DMS8 318 aa20.39■□□□□ 0.85
SIX3-201ENST00000260653 TACR3P29371 465 aa20.39■□□□□ 0.85
SIX3-201ENST00000260653 RPS18P62269 152 aaKnown RBP20.39■□□□□ 0.85
SIX3-201ENST00000260653 CSRP2Q16527 193 aa20.39■□□□□ 0.85
SIX3-201ENST00000260653 SLC35F1Q5T1Q4 408 aa20.39■□□□□ 0.85
SIX3-201ENST00000260653 C6orf15Q6UXA7 325 aaPredicted RBP20.39■□□□□ 0.85
SIX3-201ENST00000260653 HGDQ93099 445 aa20.39■□□□□ 0.85
SIX3-201ENST00000260653 DDA1Q9BW61 102 aa20.39■□□□□ 0.85
SIX3-201ENST00000260653 ZNF700Q9H0M5 742 aa20.39■□□□□ 0.85
SIX3-201ENST00000260653 WISP1O95388 367 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 DLGAP3O95886 979 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 PEX19P40855 299 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 CYP4Z2PQ8N1L4 340 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 LNX2Q8N448 690 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 OR5W2Q8NH69 310 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 CDCA4Q9BXL8 241 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 GALNT9Q9HCQ5 603 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 C2orf72A6NCS6 295 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 KDM4EB2RXH2 506 aaPredicted RBP20.38■□□□□ 0.85
SIX3-201ENST00000260653 PRODHO43272 600 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 ATE1O95260 518 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 HMGN1P05114 100 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 TCF15Q12870 199 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 OR5M10Q6IEU7 315 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 LYPD8Q6UX82 237 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 SLC46A3Q7Z3Q1 461 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 OR11G2Q8NGC1 345 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 IMMP1LQ96LU5 166 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 CCNL2Q96S94 520 aaPredicted RBP20.38■□□□□ 0.85
SIX3-201ENST00000260653 SLC19A3Q9BZV2 496 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 MED17Q9NVC6 651 aa20.38■□□□□ 0.85
SIX3-201ENST00000260653 ENDOUP21128 410 aaKnown RBP20.37■□□□□ 0.85
SIX3-201ENST00000260653 ST13P50502 369 aaKnown RBP20.37■□□□□ 0.85
SIX3-201ENST00000260653 TMBIM6P55061 237 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 BICRALQ6AI39 1079 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 BBS1Q8NFJ9 593 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 B4GALNT2Q8NHY0 566 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 FCGR1BQ92637 280 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 TMCO6Q96DC7 493 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 ADAM19Q9H013 955 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 HINT3Q9NQE9 182 aaKnown RBP20.37■□□□□ 0.85
SIX3-201ENST00000260653 FOXJ2Q9P0K8 574 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 NCDNQ9UBB6 729 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 FREM2Q5SZK8 3169 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 FAM183AA6NL82 134 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 TRMUO75648 421 aaKnown RBP20.37■□□□□ 0.85
SIX3-201ENST00000260653 TCN2P20062 427 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 PGCP20142 388 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 NR4A1P22736 598 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 P2RX1P51575 399 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 EGR4Q05215 589 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 CBFBQ13951 182 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 GXYLT1Q4G148 440 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 HES3Q5TGS1 186 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 POMZP3Q6PJE2 187 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 SLC16A12Q6ZSM3 486 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 PIAS4Q8N2W9 510 aaPredicted RBP20.37■□□□□ 0.85
SIX3-201ENST00000260653 CT55Q8WUE5 264 aa20.37■□□□□ 0.85
SIX3-201ENST00000260653 TNFRSF10AO00220 468 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 APOL3O95236 402 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 PPP1R3DO95685 299 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 NAT2P11245 290 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 NAGAP17050 411 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 CCNA2P20248 432 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 GRK5P34947 590 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 AADACL4Q5VUY2 407 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 FCRLBQ6BAA4 426 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 TMEM80Q96HE8 168 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 TMEM43Q9BTV4 400 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 PCDHGA1Q9Y5H4 931 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 CCDC187A0A096LP49 1063 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 B4DXG7 233 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 SOCS6O14544 535 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 NOL3O60936 208 aaKnown RBP20.36■□□□□ 0.85
SIX3-201ENST00000260653 SLC9A3P48764 834 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 FOXK2Q01167 660 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 TRIP6Q15654 476 aaKnown RBP20.36■□□□□ 0.85
SIX3-201ENST00000260653 COL28A1Q2UY09 1125 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 C3orf38Q5JPI3 329 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 RTL4Q6ZR62 310 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 SLC22A8Q8TCC7 542 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 RASL10BQ96S79 203 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 SPRY4Q9C004 299 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 OSGIN1Q9UJX0 560 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 TCFL5Q9UL49 500 aa20.36■□□□□ 0.85
SIX3-201ENST00000260653 MASP2O00187 686 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 OR7A10O76100 309 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 CDH11P55287 796 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 DBPQ10586 325 aaPredicted RBP20.35■□□□□ 0.85
SIX3-201ENST00000260653 CPOQ8IVL8 374 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 OR10G3Q8NGC4 313 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 RAB2BQ8WUD1 216 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 OTULINQ96BN8 352 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 YIPF6Q96EC8 236 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 ENPP5Q9UJA9 477 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 M0R082 166 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 TMED10P49755 219 aaKnown RBP20.35■□□□□ 0.85
SIX3-201ENST00000260653 GAS1P54826 345 aa20.35■□□□□ 0.85
SIX3-201ENST00000260653 QPRTQ15274 297 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms