RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 KBTBD8Q8NFY9 601 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 PIWIL2Q8TC59 973 aaKnown RBP16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 OR52E6Q96RD3 313 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 POTEKPQ9BYX7 375 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 NGBQ9NPG2 151 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 CHRNA9Q9UGM1 479 aa16.82■□□□□ 0.28
TM6SF1-201ENST00000258909 DPRXA6NFQ7 191 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 ZNF724A8MTY0 619 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 FAM171A2A8MVW0 826 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 CHRM4P08173 479 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 SOD3P08294 240 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 PAX1P15863 534 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 IGHV1-2P23083 117 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 IDH2P48735 452 aaKnown RBP16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 COX20Q5RI15 118 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 ADAM5Q6NVV9 412 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 GRINAQ7Z429 371 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 MTDHQ86UE4 582 aaKnown RBP16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 ADGRG3Q86Y34 549 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 SLC25A43Q8WUT9 341 aaPredicted RBP16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 SLC38A1Q9H2H9 487 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 GPR45Q9Y5Y3 372 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 SPIN1Q9Y657 262 aaPredicted RBP16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 HIVEP2P31629 2446 aa16.81■□□□□ 0.28
TM6SF1-201ENST00000258909 TMEM120BA0PK00 339 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 RAMP1O60894 148 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 PGRP06401 933 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 PCSK6P29122 969 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 RPS4XP62701 263 aaKnown RBP16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 AP1ARQ63HQ0 302 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 ABLIM2Q6H8Q1 611 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 SPATA19Q7Z5L4 167 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 CCDC103Q8IW40 242 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 FBXW5Q969U6 566 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 DNHD1Q96M86 4753 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 ZNF716A6NP11 495 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 ZNF500O60304 480 aaPredicted RBP16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 NTF4P34130 210 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 CDKN1AP38936 164 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 PPA1Q15181 289 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 UBE2J2Q8N2K1 259 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 TRIML2Q8N7C3 387 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 SMAP2Q8WU79 429 aaPredicted RBP16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 OIT3Q8WWZ8 545 aa16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 TRNT1Q96Q11 434 aaKnown RBP16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 EXOSC3Q9NQT5 275 aaKnown RBP16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 NOSIPQ9Y314 301 aaKnown RBP16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 MAGED1Q9Y5V3 778 aaPredicted RBP16.8■□□□□ 0.28
TM6SF1-201ENST00000258909 TMED7-TICAM2A0A0A6YYA0 188 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 AGAP5A6NIR3 686 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 HDAC3O15379 428 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 PMS2P2O95744 297 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 DANCRP0C864 163 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 GGT1P19440 569 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 OR2B6P58173 313 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 FAPQ12884 760 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 ZNF672Q499Z4 452 aaPredicted RBP16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 NXNQ6DKJ4 435 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 DNAJC14Q6Y2X3 702 aaPredicted RBP16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 ZNF433Q8N7K0 673 aaPredicted RBP16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 ZHX1-C8orf76Q96EF9 292 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 SLC6A13Q9NSD5 602 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 THAP1Q9NVV9 213 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 NPAP1Q9NZP6 1156 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 EMC3Q9P0I2 261 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 LIPT1Q9Y234 373 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 TMED7Q9Y3B3 224 aa16.79■□□□□ 0.28
TM6SF1-201ENST00000258909 IGKV3D-15A0A087WSY6 115 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 TMEM72A0PK05 275 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 SNNO75324 88 aaPredicted RBP16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 RAD51DO75771 328 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 NR2F1P10589 423 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 COX5AP20674 150 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 PTNP21246 168 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 TNK1Q13470 666 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 FBXW9Q5XUX1 488 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 LRRC74BQ6ZQY2 392 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 WDR60Q8WVS4 1066 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 GTPBP3Q969Y2 492 aaKnown RBP16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 APH1AQ96BI3 265 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 MUCL1Q96DR8 90 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 ZBTB18Q99592 522 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 USB1Q9BQ65 265 aaKnown RBP16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 TRIM2Q9C040 744 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 OSGIN1Q9UJX0 560 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 HDGFL3Q9Y3E1 203 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 PLCE1Q9P212 2302 aa16.78■□□□□ 0.28
TM6SF1-201ENST00000258909 A0A1W2PP18 115 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 A0A1W2PR80 420 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 TRPC5OSA6NMA1 111 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 OVOL3O00110 214 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 IMPDH2P12268 514 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 IL7RP16871 459 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 TACR3P29371 465 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 FOXG1P55316 489 aaPredicted RBP16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 PDK3Q15120 406 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 MAPK11Q15759 364 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 PGGHGQ32M88 737 aa16.77■□□□□ 0.28
TM6SF1-201ENST00000258909 SLC9B1Q4ZJI4 515 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms