RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CTSOP43234 321 aaPredicted RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ID4P47928 161 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 NPY4RP50391 375 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 HCCSP53701 268 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 NDUFA6P56556 154 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 UBE2V1Q13404 147 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 SNTB2Q13425 540 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 DAG1Q14118 895 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 SAMD4BQ5PRF9 694 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 BCL2L15Q5TBC7 163 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 SDHAF4Q5VUM1 108 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 RNF130Q86XS8 419 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CILP2Q8IUL8 1156 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 COMMD1Q8N668 190 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 COLGALT1Q8NBJ5 622 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 FEZF2Q8TBJ5 459 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 AUTS2Q8WXX7 1259 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 C11orf40Q8WZ69 217 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 RPUSD4Q96CM3 377 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 TMEM19Q96HH6 336 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 C4orf36Q96KX1 117 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 TP53RKQ96S44 253 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 FICDQ9BVA6 458 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 TPPP3Q9BW30 176 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 RAB1BQ9H0U4 201 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 OR51J1Q9H342 316 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 YAE1D1Q9NRH1 226 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 HCFC1R1Q9NWW0 138 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CLEC4EQ9ULY5 219 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ANGPT4Q9Y264 503 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 V9GYS6 101 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 RPL36A-HNRNPH2H7BZ11 118 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CSTBP04080 98 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 HOXC6P09630 235 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ALPIP09923 528 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CPN1P15169 458 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CXCR1P25024 350 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 SSTR1P30872 391 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CD80P33681 288 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 GLP1RP43220 463 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CDKN2DP55273 166 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CXADRP78310 365 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CAPSQ13938 189 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 RBM39Q14498 530 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 TMEM255AQ5JRV8 349 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 FSTL4Q6MZW2 842 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 EPGNQ6UW88 154 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 NUFIP2Q7Z417 695 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 C1QL4Q86Z23 238 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 SLC34A3Q8N130 599 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CPXM2Q8N436 756 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ZBTB34Q8NCN2 500 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 GLIS3Q8NEA6 775 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 FCGR1BQ92637 280 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 PINX1Q96BK5 328 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 KLRG1Q96E93 195 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CDK15Q96Q40 435 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 SLC6A7Q99884 636 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 RPF1Q9H9Y2 349 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 B4GALT6Q9UBX8 382 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 PRODH2Q9UF12 536 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 A4GNTQ9UNA3 340 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 NEU3Q9UQ49 428 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 OR10H1Q9Y4A9 318 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 PRSS21Q9Y6M0 314 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 IGSF9BQ9UPX0 1349 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 MYO18AQ92614 2054 aaKnown RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 C1orf167Q5SNV9 1468 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 DOCK2Q92608 1830 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 TRBV7-9A0A0J9YWB2 115 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 A0A1B0GUH1 482 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 TRBC2A0A5B9 178 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 OR5H14A6NHG9 310 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 H3BN98 237 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CH25HO95992 272 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 TCRBP04435 133 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ALDOBP05062 364 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 SERPINE1P05121 402 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 GTF2F2P13984 249 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 GSTM3P21266 225 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ACKR3P25106 362 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 MPZP25189 248 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 LGALS7P47929 136 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 RFX5P48382 616 aaPredicted RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ARRB1P49407 418 aaPredicted RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 FXR2P51116 673 aaKnown RBP eCLIP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 RAB7AP51149 207 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 RIPPLY3P57055 190 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 TAS2R38P59533 333 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 CDC42EP1Q00587 391 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 JOSD1Q15040 202 aaPredicted RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 PCBP2Q15366 365 aaKnown RBP eCLIP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 PSG3Q16557 428 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 FAM110CQ1W6H9 321 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 LDLRAD2Q5SZI1 272 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 DCST1Q5T197 706 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 N4BP2L1Q5TBK1 243 aaPredicted RBP7.18□□□□□ -1.26
GPNMB-201ENST00000258733 NKAIN2Q5VXU1 208 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 ADAM5Q6NVV9 412 aa7.18□□□□□ -1.26
GPNMB-201ENST00000258733 LINC01551Q86U37 167 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms