RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 FAM20BO75063 409 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 TP53P04637 393 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-201ENST00000238688 POU2F1P14859 743 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 PGCP20142 388 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 MSX1P28360 303 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 EPHA2P29317 976 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 PCYT1AP49585 367 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 DLX5P56178 289 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 PLAURQ03405 335 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 TMED1Q13445 227 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 NADK2Q4G0N4 442 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 LAIR2Q6ISS4 152 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 NKAIN4Q8IVV8 208 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 PRSS58Q8IYP2 241 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 BPIFB6Q8NFQ5 453 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 OR2T33Q8NG76 320 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 DOK4Q8TEW6 326 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 LIPHQ8WWY8 451 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 RFKQ969G6 155 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 EFHD2Q96C19 240 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-201ENST00000238688 SIGLEC11Q96RL6 698 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 ADOQ96SZ5 270 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 GPR87Q9BY21 358 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 FN3KQ9H479 309 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 MMP25Q9NPA2 562 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 SDHAF3Q9NRP4 125 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 PSORS1C1Q9UIG5 152 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 ICAM5Q9UMF0 924 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 RPL36Q9Y3U8 105 aaKnown RBP12.06□□□□□ -0.48
SLIRP-201ENST00000238688 SHANK1Q9Y566 2161 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 RELNP78509 3460 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 HECTD1Q9ULT8 2610 aa12.06□□□□□ -0.48
SLIRP-201ENST00000238688 RP1L1Q8IWN7 2480 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-201ENST00000238688 NPIPA5A0A0B4J1W7 369 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 CDC14CA4D256 554 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 UNC119BA6NIH7 251 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 NPIPA7E9PJI5 369 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 NDUFB5O43674 189 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 KLF7O75840 302 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-201ENST00000238688 THY1P04216 161 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 GKN3PP0CG01 181 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 NPIPA8P0DM63 369 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 PRG2P13727 222 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 BMP7P18075 431 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 EVI2BP34910 448 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 GRK5P34947 590 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 SLC1A3P43003 542 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 SNTA1Q13424 505 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 IL10RAQ13651 578 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 CBFBQ13951 182 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 TBCEQ15813 527 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-201ENST00000238688 ARMC4Q5T2S8 1044 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 SPARTQ8N0X7 666 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 ZNF321PQ8N8H1 164 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 ZNF540Q8NDQ6 660 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 OR5W2Q8NH69 310 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 CNIH3Q8TBE1 160 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 PHOSPHO1Q8TCT1 267 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 ELP5Q8TE02 316 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 ADAMTS17Q8TE56 1095 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 TMEM255BQ8WV15 326 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 APH1BQ8WW43 257 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 TMEM234Q8WY98 164 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 BPIFA2Q96DR5 249 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 IP6K3Q96PC2 410 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 POLHQ9Y253 713 aa12.05□□□□□ -0.48
SLIRP-201ENST00000238688 MPDZO75970 2070 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 IGLV3-32A0A0A0MS00 114 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 IGHV1-45A0A0A0MS14 117 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 IDH3BO43837 385 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 FADS1O60427 444 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 ICOSLGO75144 302 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 CNOT3O75175 753 aaKnown RBP12.04□□□□□ -0.48
SLIRP-201ENST00000238688 PDGFAP04085 211 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
SLIRP-201ENST00000238688 POU1F1P28069 291 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 P2RX1P51575 399 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 EFNB1P98172 346 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 TLE1Q04724 770 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 C17orf67Q0P5P2 114 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 GINS1Q14691 196 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 SSPNQ14714 243 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 PCOLCEQ15113 449 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 NNATQ16517 81 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 FAM69BQ5VUD6 431 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 RTL4Q6ZR62 310 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 KCTD8Q6ZWB6 473 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 NDUFAF7Q7L592 441 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 HMGN2P46Q86SG4 172 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 OR6S1Q8NH40 331 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 ST8SIA1Q92185 356 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 C3orf49Q96BT1 292 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 DTNBP1Q96EV8 351 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 FAM46AQ96IP4 442 aaKnown RBP12.04□□□□□ -0.48
SLIRP-201ENST00000238688 IMMP1LQ96LU5 166 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 COPS4Q9BT78 406 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 CDCA4Q9BXL8 241 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 DEFB126Q9BYW3 111 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 ADAM19Q9H013 955 aa12.04□□□□□ -0.48
SLIRP-201ENST00000238688 RBM38Q9H0Z9 239 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms