RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CNTNAP3BQ96NU0 1288 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 ARHGDIGQ99819 225 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 CNTNAP3Q9BZ76 1288 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 SLC6A15Q9H2J7 730 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 ARMC1Q9NVT9 282 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 NDUFAF4Q9P032 175 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 CNOT11Q9UKZ1 510 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 C15orf41Q9Y2V0 281 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 IGF2RP11717 2491 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 CEP295Q9C0D2 2601 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 A0A1W2PRG6 482 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 FUT1P19526 365 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 VHLP40337 213 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 SLC35A1P78382 337 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 ZIK1Q3SY52 487 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 SWT1Q5T5J6 900 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 JAZF1Q86VZ6 243 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 TMEM251Q8N6I4 163 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 GPR32P1Q8NGA4 272 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 PNPLA2Q96AD5 504 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 PKP2Q99959 881 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 OAZ3Q9UMX2 235 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 SNTNA6NMZ2 147 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 NEURL1O76050 574 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 PAICSP22234 425 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 PTGS2P35354 604 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 GPR4P46093 362 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 INPP5JQ15735 1006 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 RNF113BQ8IZP6 322 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 CBR4Q8N4T8 237 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 KLHL15Q96M94 604 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 UCK2Q9BZX2 261 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 PAQR5Q9NXK6 330 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 OSGIN1Q9UJX0 560 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 ACACBO00763 2458 aa10.11□□□□□ -0.79
TNFAIP3-201ENST00000237289 TRAV36DV7A0A075B6V5 113 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 CENPVL1A0A0U1RR11 272 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 SHISA8B8ZZ34 492 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 ZNF354AO60765 605 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 ZNF43P17038 809 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 MAP3K8P41279 467 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 SKP2Q13309 424 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 GK3PQ14409 553 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 C1orf140Q5VVS0 124 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 SLC6A19Q695T7 634 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 FAM83FQ8NEG4 500 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 BPIFA2Q96DR5 249 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 C8orf4Q9NR00 106 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 QPCTLQ9NXS2 382 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 TUBD1Q9UJT1 453 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 EIF1BO60739 113 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 PRKACGP22612 351 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 HSPA13P48723 471 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 CDC42P60953 191 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 PODNL1Q6PEZ8 512 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 APOOLQ6UXV4 268 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 UBE2J2Q8N2K1 259 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 FAM46AQ96IP4 442 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 PAPOLBQ9NRJ5 636 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 POLR1DQ9Y2S0 133 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 LYVE1Q9Y5Y7 322 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 SVILO95425 2214 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 UNC119BA6NIH7 251 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 TMEM200CA6NKL6 621 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 ENO4A6NNW6 628 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 HOXB9P17482 250 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 ADH6P28332 368 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 STARP49675 285 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 SYT14P1Q58G82 188 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 SMARCD3Q6STE5 483 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 DHRSXQ8N5I4 330 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 ANKRD19PQ9H560 264 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 TRGV8A0A0C4DH27 118 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 ENPP1P22413 925 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 KRTCAP3Q53RY4 240 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 CLEC12AQ5QGZ9 265 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 TMEM201Q5SNT2 666 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 OSTF1Q92882 214 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 POFUT2Q9Y2G5 429 aa10.1□□□□□ -0.79
TNFAIP3-201ENST00000237289 ZNF292O60281 2723 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 OR2M5A3KFT3 312 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 HLA-DQA2P01906 255 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 SLC6A6P31641 620 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 TOMM34Q15785 309 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 FAM69AQ5T7M9 428 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 ZNF100Q8IYN0 542 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 OR6N1Q8NGY5 312 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 LRRC46Q96FV0 321 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 APOL4Q9BPW4 351 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 OSBPL10Q9BXB5 764 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 OR11A1Q9GZK7 315 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 KCNE5Q9UJ90 142 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 AP4B1Q9Y6B7 739 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 A0A1W2PNR3 127 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 BCL10O95999 233 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 NR2C1P13056 603 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 RAC1P63000 192 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 MICAQ29983 383 aa10.09□□□□□ -0.79
TNFAIP3-201ENST00000237289 NADK2Q4G0N4 442 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms