RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ATP5J2P56134 94 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 RASGEF1BQ0VAM2 473 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 ZNF141Q15928 474 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 SMU1Q2TAY7 513 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 C3orf33Q6P1S2 294 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.3□□□□□ -0.28
UPK3A-201ENST00000216211 C16orf62Q7Z3J2 963 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 ANKRD46Q86W74 232 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 TREML1Q86YW5 311 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 HSD17B8Q92506 261 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 NEUROG1Q92886 237 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 SLC7A6OSQ96CW6 309 aaPredicted RBP13.3□□□□□ -0.28
UPK3A-201ENST00000216211 ZNF300Q96RE9 604 aaPredicted RBP13.3□□□□□ -0.28
UPK3A-201ENST00000216211 WDR55Q9H6Y2 383 aaPredicted RBP13.3□□□□□ -0.28
UPK3A-201ENST00000216211 BCO1Q9HAY6 547 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 ARMCX1Q9P291 453 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 KLHL9Q9P2J3 617 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 TAGLN3Q9UI15 199 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 RNF115Q9Y4L5 304 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 CR1P17927 2039 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 ABCA2Q9BZC7 2435 aa13.3□□□□□ -0.28
UPK3A-201ENST00000216211 SLC22A2O15244 555 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 CYTIPO60759 359 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 DNAJA2O60884 412 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 LYZL6O75951 148 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 CPSF4O95639 269 aaKnown RBP13.29□□□□□ -0.28
UPK3A-201ENST00000216211 CSTAP01040 98 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 OR12D1P0DN82 309 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 NQO1P15559 274 aaKnown RBP13.29□□□□□ -0.28
UPK3A-201ENST00000216211 EPHA3P29320 983 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 PRDX6P30041 224 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 SESN3P58005 492 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 RPS4XP62701 263 aaKnown RBP13.29□□□□□ -0.28
UPK3A-201ENST00000216211 MERTKQ12866 999 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 ITGADQ13349 1161 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 P2RY6Q15077 328 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 MAPK14Q16539 360 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 ADAM5Q6NVV9 412 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 TNFAIP8L2Q6P589 184 aaPredicted RBP13.29□□□□□ -0.28
UPK3A-201ENST00000216211 BHLHA15Q7RTS1 189 aaPredicted RBP13.29□□□□□ -0.28
UPK3A-201ENST00000216211 OR8J2Q8NGG1 315 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 ST8SIA1Q92185 356 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 RAB8BQ92930 207 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 FBXW5Q969U6 566 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 DPY30Q9C005 99 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 ZNF350Q9GZX5 532 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 ZNF385DQ9H6B1 395 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 ESRP2Q9H6T0 727 aaKnown RBP13.29□□□□□ -0.28
UPK3A-201ENST00000216211 MRGBPQ9NV56 204 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 EXD2Q9NVH0 621 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 PRDM4Q9UKN5 801 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 PCDHGB4Q9UN71 923 aa13.29□□□□□ -0.28
UPK3A-201ENST00000216211 ANK3Q12955 4377 aaKnown RBP13.29□□□□□ -0.28
UPK3A-201ENST00000216211 GOLGA8QA0A0J9YX86 632 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 GOLGA8OA6NCC3 632 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 GOLGA8NF8WBI6 632 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 SCN2BO60939 215 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 TMCC2O75069 709 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 BCAS1O75363 584 aaPredicted RBP13.28□□□□□ -0.28
UPK3A-201ENST00000216211 FESP07332 822 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 SOD3P08294 240 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 NCF2P19878 526 aaPredicted RBP13.28□□□□□ -0.28
UPK3A-201ENST00000216211 PGCP20142 388 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 OR3A2P47893 321 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 DIO1P49895 249 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 PHC1P78364 1004 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 BSPH1Q075Z2 132 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 STK11Q15831 433 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 TYW3Q6IPR3 259 aaKnown RBP13.28□□□□□ -0.28
UPK3A-201ENST00000216211 HEPHL1Q6MZM0 1159 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 SEZ6L2Q6UXD5 910 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 Q6ZT83 130 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 EIF3MQ7L2H7 374 aaKnown RBP13.28□□□□□ -0.28
UPK3A-201ENST00000216211 KBTBD8Q8NFY9 601 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 XAGE5Q8WWM1 108 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 DNAJA3Q96EY1 480 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 POTEKPQ9BYX7 375 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 NGBQ9NPG2 151 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 SERINC1Q9NRX5 453 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 ACER3Q9NUN7 267 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 CADP27708 2225 aa13.28□□□□□ -0.28
UPK3A-201ENST00000216211 DPRXA6NFQ7 191 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 INAFM1C9JVW0 142 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 E9PBE3 544 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 SULT2B1O00204 365 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 KIAA0513O60268 411 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 DANCRP0C864 163 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 UQCRC2P22695 453 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 PGM1P36871 562 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 CDKN1AP38936 164 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 FUT5Q11128 374 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 KLF10Q13118 480 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 TNK1Q13470 666 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 ZNF672Q499Z4 452 aaPredicted RBP13.27□□□□□ -0.29
UPK3A-201ENST00000216211 SYT14P1Q58G82 188 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 TMPPEQ6ZT21 453 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 HMGN2P46Q86SG4 172 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 LSRQ86X29 649 aaPredicted RBP13.27□□□□□ -0.29
UPK3A-201ENST00000216211 PRIMA1Q86XR5 153 aa13.27□□□□□ -0.29
UPK3A-201ENST00000216211 ZNF563Q8TA94 476 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms