RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ITGB2P05107 769 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ANXA7P20073 488 aaKnown RBP9.79□□□□□ -0.84
VCL-201ENST00000211998 PTBP1P26599 531 aaKnown RBP eCLIP9.79□□□□□ -0.843e-7■■■■□ 20.9
VCL-201ENST00000211998 FABP6P51161 128 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SLC35A2P78381 396 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SCAPQ12770 1279 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 C3orf38Q5JPI3 329 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GPR155Q7Z3F1 870 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 OR51T1Q8NGJ9 327 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ADAMTS18Q8TE60 1221 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 RNF170Q96K19 258 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SMG9Q9H0W8 520 aaKnown RBP9.79□□□□□ -0.84
VCL-201ENST00000211998 CAMK2AQ9UQM7 478 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 SNX11Q9Y5W9 270 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 KCPQ6ZWJ8 1503 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 JMJD7P0C870 316 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 UBL4AP11441 157 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 CLDN12P56749 244 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 JAG1P78504 1218 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 GPR50Q13585 617 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 ELAVL3Q14576 367 aaKnown RBP9.79□□□□□ -0.84
VCL-201ENST00000211998 MEPCEQ7L2J0 689 aaKnown RBP9.79□□□□□ -0.84
VCL-201ENST00000211998 BAGE3Q86Y29 109 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 BAGE2Q86Y30 109 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 OR52A5Q9H2C5 316 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 CLMPQ9H6B4 373 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 WIF1Q9Y5W5 379 aa9.79□□□□□ -0.84
VCL-201ENST00000211998 RTCAO00442 366 aaKnown RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 SCAF4O95104 1147 aaKnown RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 AK1P00568 194 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 APOA2P02652 100 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 ACSM4P0C7M7 580 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 ACTBL2Q562R1 376 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 CLLU1Q5K131 121 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 DLK2Q6UY11 383 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 KIAA0907Q7Z7F0 614 aaPredicted RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 PTRH1Q86Y79 214 aaKnown RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 KCNRGQ8N5I3 272 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 NPWQ8N729 165 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 OR1S1Q8NH92 325 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 MZB1Q8WU39 189 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 BCL7CQ8WUZ0 217 aaPredicted RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 HOXB13Q92826 284 aaPredicted RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 TMEM43Q9BTV4 400 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 OR8D2Q9GZM6 311 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 IL23AQ9NPF7 189 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 CXXC1Q9P0U4 656 aaPredicted RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 MYH15Q9Y2K3 1946 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 PIGBOS1A0A0B4J2F0 54 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 TCRBV21S2A2A0A5A6 115 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 ZNF587BE7ETH6 402 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 GJB5O95377 273 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 SYNGR4O95473 234 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 TYRP1P17643 537 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 SLC1A3P43003 542 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 GATMP50440 423 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 CLRN1P58418 232 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 SCGB2A2Q13296 93 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 SLC14A1Q13336 389 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 TAS1R3Q7RTX0 852 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 SMIM15Q7Z3B0 74 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 C1orf87Q8N0U7 546 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 OR51D1Q8NGF3 324 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 SLC25A31Q9H0C2 315 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 GAR1Q9NY12 217 aaKnown RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 CLEC2DQ9UHP7 191 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 C1orf226A1L170 272 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 POM121BA6NF01 834 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 NUDT19A8MXV4 375 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 ASGR2P07307 311 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 ZNF84P51523 738 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 CCR9P51686 369 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 CLDN20P56880 219 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 PIP5KL1Q5T9C9 394 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 GLCCI1Q86VQ1 547 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 OR5M8Q8NGP6 311 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 MITD1Q8WV92 249 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 MMABQ96EY8 250 aaPredicted RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 ADAM19Q9H013 955 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 FN3KRPQ9HA64 309 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 INPP5EQ9NRR6 644 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 SLCO3A1Q9UIG8 710 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 SURF4O15260 269 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 DPM1O60762 260 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 RNGTTO60942 597 aaKnown RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 CD63P08962 238 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 EPHA5P54756 1037 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 RPS15AP62244 130 aaKnown RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 SNTB1Q13884 538 aaKnown RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 CLINT1Q14677 625 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 Q3ZCU0 254 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 DPY19L4Q7Z388 723 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 COMMD6Q7Z4G1 85 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 SULF2Q8IWU5 870 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 LRRC56Q8IYG6 542 aaPredicted RBP9.78□□□□□ -0.84
VCL-201ENST00000211998 OR8J2Q8NGG1 315 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 MBOAT4Q96T53 435 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 ZNF559Q9BR84 538 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 AMBRA1Q9C0C7 1298 aa9.78□□□□□ -0.84
VCL-201ENST00000211998 CDCP1Q9H5V8 836 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms