RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 RhbgQ8BUX5 455 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Rae1Q8C570 368 aaKnown RBP6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Cbr3Q8K354 277 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Mmd2Q8R189 247 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Snx4Q91YJ2 450 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Lactb2Q99KR3 288 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Q9CQM1 111 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Acad8Q9D7B6 413 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Spata19Q9DAQ9 154 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Hmg20aQ9DC33 346 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Cnot9Q9JKY0 299 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 SigirrQ9JLZ8 409 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Qtrt1Q9JMA2 403 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Bcl10Q9Z0H7 233 aa6.92□□□□□ -1.3
Usp40-204ENSMUST00000187758 Col6a3E9PWQ3 3284 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Lrrc72A0A1Y7VMI0 288 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Mthfd2lD3YZG8 338 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Tmem200cJ3QK46 637 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Hmox2O70252 315 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Gstm3P19639 218 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Olfr13P34984 310 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Copz1P61924 177 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 ErfP70459 551 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Tusc1Q673H1 205 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Myl12aQ6ZWQ9 172 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Slitrk5Q810B7 957 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Sult2a8Q8BGL3 282 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Nabp1Q8BGW5 198 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Nup107Q8BH74 926 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Clrn3Q8BHH8 226 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Cadm2Q8BLQ9 435 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Bnc2Q8BMQ3 1127 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Olfr61Q8VGM2 311 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Abcg5Q99PE8 652 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Tmem225Q9D9S2 230 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Exosc1Q9DAA6 195 aaKnown RBP6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Dkk3Q9QUN9 349 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Gm14418A2ARR6 358 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Gm14322A2AW66 358 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Gm3752A6NAT4 150 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Gm45711E0CXA2 391 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Gm5407E9Q7Q1 248 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Hmgn1P18608 96 aaKnown RBP6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Ankrd42Q3V096 527 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Pydc3Q3V3Q4 588 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 BpiQ67E05 483 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Cpeb4Q7TN98 729 aaKnown RBP6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Rcn3Q8BH97 328 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Plekhm3Q8BM47 761 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Gucd1Q8BZI6 239 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Ctxn1Q8K129 82 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Scmh1Q8K214 706 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Stk32cQ8QZV4 488 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Olfr97Q8VFE1 310 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Lims1Q99JW4 325 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 HadhbQ99JY0 475 aaKnown RBP6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Vmp1Q99KU0 406 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Ndufa5Q9CPP6 116 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 B3gat1Q9CW73 334 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Pbdc1Q9D0B6 198 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 UqcrbQ9D855 111 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Tmem38bQ9DAV9 292 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Slc30a7Q9JKN1 378 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Cd320Q9Z1P5 260 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Rhbdl2A2AGA4 302 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Olfr1076A2AK60 313 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Lancl1O89112 399 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 LumP51885 338 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 MitfQ08874 526 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Slc5a6Q5U4D8 634 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Nr1d2Q60674 576 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Laptm5Q61168 261 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Apex2Q68G58 516 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Olfr1015Q7TR94 312 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Fbxo34Q80XI1 695 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Nectin4Q8R007 508 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Hyal3Q8VEI3 412 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Tmem246Q91YV9 403 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Scpep1Q920A5 452 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Slc25a37Q920G8 338 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Pole4Q9CQ36 118 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Q9CZV2 255 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Sacm1lQ9EP69 587 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Tor1aQ9ER39 333 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 Jph1Q9ET80 660 aa6.91□□□□□ -1.3
Usp40-204ENSMUST00000187758 ItpkbB2RXC2 942 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Cdh19E9Q3A7 770 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Prdx4O08807 274 aaKnown RBP6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Clk3O35492 638 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Pip5k1cO70161 661 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Nme6O88425 189 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Mtnd4P03911 459 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 LipcP27656 510 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Cdc25bP30306 576 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 VipP32648 170 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Kcnj12P52187 427 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 CckbrP56481 453 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Sox14Q04892 240 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Prelid2Q0VBB0 177 aa6.9□□□□□ -1.3
Usp40-204ENSMUST00000187758 Zdhhc11Q14AK4 347 aa6.9□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms