RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Cramp1Q6PG95 1285 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Fblim1Q71FD7 375 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 QpctlQ8BH73 383 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Palm2Q8BR92 376 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm4922Q8C0N0 497 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Phf21bQ8C966 487 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Olfr510Q8VEW6 314 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Siglec5Q920G3 569 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Slc22a30Q96LX3 552 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Zc3h8Q9JJ48 305 aaKnown RBP21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Dennd4cA6H8H2 1906 aa21.1■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm21800J3QMJ9 180 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Anxa3O35639 323 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Msx1P13297 303 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 TesP47226 423 aaKnown RBP21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Rpl6P47911 296 aaKnown RBP21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Elavl1P70372 326 aaKnown RBP21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 LvrnQ2KHK3 559 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Tmem251Q8BH26 163 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Wdr48Q8BH57 676 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 MkxQ8BIA3 353 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Pou6f2Q8BJI4 691 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm10330Q8BKS1 112 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Kcnmb1Q8CAE3 191 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Slc22a12Q8CFZ5 553 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Prokr2Q8K458 381 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Il36aQ9JLA2 160 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Ints1Q6P4S8 2195 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm11634A0A1B0GSX1 172 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Cyp2j8G3UZ38 503 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Vmn2r51L7N215 852 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Psmc3ipO35047 217 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Bmp4P21275 408 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 ArntP53762 791 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Olfr1015Q7TR94 312 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Cstf2Q8BIQ5 580 aaKnown RBP21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Spata33Q8C624 132 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Rhno1Q8K3A4 235 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Slc2a10Q8VHD6 536 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Satb2Q8VI24 733 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gbgt1Q8VI38 347 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Acsm1Q91VA0 573 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Wdr45Q91VM3 360 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 D930007J09RikQ9D2K6 131 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Olfr71Q9QZ18 312 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Pmm2Q9Z2M7 242 aa21.09■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Olfr1032A2ATE5 310 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm8180E9PXN0 145 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Hoxc5P32043 222 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Cxcr4P70658 359 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 SgcdP82347 289 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 BC080695Q66JY9 481 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Gm5416Q6IE28 97 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 RgmaQ6PCX7 454 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Acsm4Q80W40 580 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Nabp1Q8BGW5 198 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Lhfpl6Q8BM86 200 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Bnc2Q8BMQ3 1127 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Dusp28Q8BTR5 163 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Ccdc92Q8VDN4 314 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Olfr97Q8VFE1 310 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Msantd3Q9CR78 275 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Tvp23bQ9D8T4 205 aa21.08■□□□□ 0.97
Upf3a-201ENSMUST00000043767 Ighv1-42A0A0A6YY38 117 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Olfr543E9PWI5 336 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Papss2O88428 621 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Slc6a18O88576 615 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Cyp1a2P00186 513 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 AhrrQ3U1U7 701 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Cdkn2dQ60773 166 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Fzd7Q61090 572 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Tas2r13Q7M720 305 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Ubash3bQ8BGG7 638 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 P2ry10bQ8BY68 352 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Rfwd3Q8CIK8 774 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Snx4Q91YJ2 450 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 SelenosQ9BCZ4 190 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Dctn3Q9Z0Y1 186 aa21.08■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Ice1E9Q286 2241 aaKnown RBP21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Slc10a1O08705 362 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Zfp26P10076 861 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Mup4P11590 178 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Syt4P40749 425 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Cd59bP58019 129 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Btbd3P58545 530 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Sirt6P59941 334 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 WdcpQ6NV72 663 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 SnupnQ80W37 358 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Q8C0X8 640 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 CipcQ8R0W1 432 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Olfr561Q8VGZ6 314 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Pdzk1Q9JIL4 519 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Mmp17Q9R0S3 578 aa21.07■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Ighv16-1A0A0A6YW39 117 aa21.06■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Vmn2r110E9PWD5 858 aa21.06■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Atp1b1P14094 304 aaKnown RBP21.06■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Cst3P21460 140 aa21.06■□□□□ 0.96
Upf3a-201ENSMUST00000043767 CpoxP36552 443 aa21.06■□□□□ 0.96
Upf3a-201ENSMUST00000043767 Gbx2P48031 348 aa21.06■□□□□ 0.96
Upf3a-201ENSMUST00000043767 StsP50427 624 aa21.06■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms