RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 NSD1Q96L73 2696 aaPredicted RBP12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 SLC22A3O75751 556 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 YES1P07947 543 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 PSMB1P20618 241 aaKnown RBP12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 ANXA11P50995 505 aaKnown RBP12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 KCNJ10P78508 379 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 PLAURQ03405 335 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 LRRC74AQ0VAA2 488 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 TSC22D1Q15714 1073 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 SYT14P1Q58G82 188 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 BEX5Q5H9J7 111 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 ARFGAP2Q8N6H7 521 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 MAELQ96JY0 434 aaKnown RBP12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 TRNT1Q96Q11 434 aaKnown RBP12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 OR52B2Q96RD2 323 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 GP6Q9HCN6 339 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 CTPS2Q9NRF8 586 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 KLHL9Q9P2J3 617 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 LIPT1Q9Y234 373 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 GPR52Q9Y2T5 361 aa12.81□□□□□ -0.36
HNRNPU-229ENST00000640440 SULT2B1O00204 365 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 RFXANKO14593 260 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 SMAD9O15198 467 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 KLF4O43474 513 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 ADAM11O75078 769 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 GCM2O75603 506 aaPredicted RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 KRT75O95678 551 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 IL6P05231 212 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 FESP07332 822 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 TFPIP10646 304 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 APOBEC1P41238 236 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 DIO1P49895 249 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 TXNL4AP83876 142 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 RASGEF1BQ0VAM2 473 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 ACKR1Q16570 336 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 AP1ARQ63HQ0 302 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 HDXQ7Z353 690 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 GRINAQ7Z429 371 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 LSRQ86X29 649 aaPredicted RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 GABRG1Q8N1C3 465 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 OR9I1Q8NGQ6 314 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 PIWIL2Q8TC59 973 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 SLC25A43Q8WUT9 341 aaPredicted RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 CNOT9Q92600 299 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 S100PBPQ96BU1 408 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 DNAJA3Q96EY1 480 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 ZNF300Q96RE9 604 aaPredicted RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 CCL19Q99731 98 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 PSD2Q9BQI7 771 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 TACO1Q9BSH4 297 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 CCDC106Q9BWC9 280 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 OR10A4Q9H209 315 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 SLC38A1Q9H2H9 487 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 BCO1Q9HAY6 547 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 EXOSC3Q9NQT5 275 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 SLC6A13Q9NSD5 602 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 CHRNA9Q9UGM1 479 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 ING1Q9UK53 422 aaPredicted RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 SPIN1Q9Y657 262 aaPredicted RBP12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 ZANQ9Y493 2812 aa12.8□□□□□ -0.36
HNRNPU-229ENST00000640440 AGAP5A6NIR3 686 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 KLF11O14901 512 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 UBDO15205 165 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 CYTIPO60759 359 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 SMPD2O60906 423 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 ADAP00813 363 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 NR2F1P10589 423 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 FPR1P21462 350 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 IL32P24001 234 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 IDH2P48735 452 aaKnown RBP12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 CSNK2A1P68400 391 aaPredicted RBP12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 NKX6-1P78426 367 aaPredicted RBP12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 GSTA3Q16772 222 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 C20orf204Q6ZNR8 217 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 LRRC74BQ6ZQY2 392 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 TMPPEQ6ZT21 453 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 KRTAP1-3Q8IUG1 177 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 STEAP2Q8NFT2 490 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 WDR60Q8WVS4 1066 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 ZNF75CPQ92670 426 aaPredicted RBP12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 PIGTQ969N2 578 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 ZNF775Q96BV0 537 aaPredicted RBP12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 PLPPR2Q96GM1 343 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 DLL4Q9NR61 685 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 SDR39U1Q9NRG7 319 aaPredicted RBP12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 ZIM2Q9NZV7 527 aa12.79□□□□□ -0.36
HNRNPU-229ENST00000640440 ZNF814B7Z6K7 855 aa12.78□□□□□ -0.36
HNRNPU-229ENST00000640440 AP3D1O14617 1153 aa12.78□□□□□ -0.36
HNRNPU-229ENST00000640440 ANP32DO95626 131 aa12.78□□□□□ -0.36
HNRNPU-229ENST00000640440 CCNA2P20248 432 aa12.78□□□□□ -0.36
HNRNPU-229ENST00000640440 RPS4Y1P22090 263 aaKnown RBP12.78□□□□□ -0.36
HNRNPU-229ENST00000640440 EDNRAP25101 427 aa12.78□□□□□ -0.36
HNRNPU-229ENST00000640440 HOXC12P31275 282 aa12.78□□□□□ -0.36
HNRNPU-229ENST00000640440 OR3A2P47893 321 aa12.78□□□□□ -0.36
HNRNPU-229ENST00000640440 NR1H2P55055 460 aa12.78□□□□□ -0.36
HNRNPU-229ENST00000640440 GTDC1Q4AE62 458 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms