RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 POU3F4P49335 361 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 RBP2P50120 134 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 CD81P60033 236 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 RNF4P78317 190 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 CHAF1BQ13112 559 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 DNM1P46Q6ZS02 220 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 PRSS45Q7RTY3 260 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 CEACAM19Q7Z692 300 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 PARGQ86W56 976 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 ANGPTL5Q86XS5 388 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 OR52I2Q8NH67 350 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 ABHD4Q8TB40 342 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 XAGE5Q8WWM1 108 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 ASB11Q8WXH4 323 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 PIGKQ92643 395 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 HIST1H2BAQ96A08 127 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 MALSU1Q96EH3 234 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 C2orf88Q9BSF0 95 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 BOCQ9BWV1 1114 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 PLA2G12AQ9BZM1 189 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 ACKR4Q9NPB9 350 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 MYNNQ9NPC7 610 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 ICKQ9UPZ9 632 aa11.15□□□□□ -0.62
CAPN3-221ENST00000638141 RNF222A6NCQ9 220 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 POM121BA6NF01 834 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 AP4M1O00189 453 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 SNRPBP14678 240 aaKnown RBP11.14□□□□□ -0.63
CAPN3-221ENST00000638141 SDHBP21912 280 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 ITGA3P26006 1051 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 CTSOP43234 321 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-221ENST00000638141 RAB5CP51148 216 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 PRR5P85299 388 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 SORDQ00796 357 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 EFEMP1Q12805 493 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 ZXDCQ2QGD7 858 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-221ENST00000638141 FAM83HQ6ZRV2 1179 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-221ENST00000638141 ZNF546Q86UE3 836 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 DMRTC2Q8IXT2 367 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-221ENST00000638141 ACBD7Q8N6N7 88 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 ZSCAN1Q8NBB4 408 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 OR5W2Q8NH69 310 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 FCAMRQ8WWV6 532 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 PPCDCQ96CD2 204 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 ZNF607Q96SK3 696 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 MESP1Q9BRJ9 268 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.14□□□□□ -0.63
CAPN3-221ENST00000638141 AP5M1Q9H0R1 490 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 CCDC86Q9H6F5 360 aaKnown RBP11.14□□□□□ -0.63
CAPN3-221ENST00000638141 MMP26Q9NRE1 261 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 UQCC1Q9NVA1 299 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 CRLS1Q9UJA2 301 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 TNFSF18Q9UNG2 199 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 PCDHGC4Q9Y5F7 938 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 E7EQ34 232 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 GOSR2O14653 212 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 KIAA0355O15063 1070 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 SURF4O15260 269 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 ACTL6AO96019 429 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 FURINP09958 794 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 C2orf68Q2NKX9 166 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 C18orf63Q68DL7 685 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 FAM151BQ6UXP7 276 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 LINGO2Q7L985 606 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 NXPE1Q8N323 547 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 CHST14Q8NCH0 376 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 OR4D9Q8NGE8 314 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 TMEM40Q8WWA1 233 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 ACOT11Q8WXI4 607 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-221ENST00000638141 PPP1R16AQ96I34 528 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 TIMP4Q99727 224 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 MAN2C1Q9NTJ4 1040 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 MARCH2Q9P0N8 246 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 GPR52Q9Y2T5 361 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 MAP4K5Q9Y4K4 846 aa11.14□□□□□ -0.63
CAPN3-221ENST00000638141 SMIM10L2AP0DMW4 78 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 SMIM10L2BP0DMW5 78 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 SDHAP31040 664 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 FAUP35544 74 aaKnown RBP11.13□□□□□ -0.63
CAPN3-221ENST00000638141 PPT1P50897 306 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 LUMP51884 338 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-221ENST00000638141 LBX1P52954 281 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 PFN3P60673 137 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 TSPAN31Q12999 210 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 NKPD1Q17RQ9 610 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 PLEKHS1Q5SXH7 462 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 DCAF12L2Q5VW00 463 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 OVCH1Q7RTY7 1134 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 APCDD1Q8J025 514 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 GJD3Q8N144 294 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 ARRDC1Q8N5I2 433 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 RASGEF1AQ8N9B8 481 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 OR5D16Q8NGK9 328 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 STOML3Q8TAV4 291 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 CLP1Q92989 425 aaKnown RBP11.13□□□□□ -0.63
CAPN3-221ENST00000638141 SMIM14Q96QK8 99 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 GPA33Q99795 319 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 ALG8Q9BVK2 526 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 FNDC11Q9BVV2 318 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 TOLLIPQ9H0E2 274 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 WDR13Q9H1Z4 485 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms