RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 BMPERQ8N8U9 685 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 GNPDA2Q8TDQ7 276 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF764Q96H86 408 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 TREX2Q9BQ50 279 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 TAPBPLQ9BX59 468 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 RACGAP1Q9H0H5 632 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 SERHL2Q9H4I8 314 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 RAXQ9Y2V3 346 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 PCDH15Q96QU1 1955 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 A0A087WV62 115 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 C10orf142B7Z368 130 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 MSL3P1P0C860 447 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 SAGP10523 405 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 CBLP22681 906 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 NOS3P29474 1203 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 GRK5P34947 590 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 TRHRP34981 398 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 LIPAP38571 399 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 IRF3Q14653 427 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 SAXO2Q658L1 398 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 KIRREL2Q6UWL6 708 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 DUSP19Q8WTR2 217 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC38A5Q8WUX1 472 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC25A36Q96CQ1 311 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 FUZQ9BT04 418 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 OSGIN1Q9UJX0 560 aa11.46□□□□□ -0.58
SYNGAP1-207ENST00000628646 LOC100506127A0A0U1RQW1 187 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 CD36P16671 472 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 GDF1P27539 372 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 C21orf33P30042 268 aaPredicted RBP11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 PDX1P52945 283 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 PRICKLE4Q2TBC4 344 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 ACER2Q5QJU3 275 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 PRAMEF8Q5VWM4 474 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 PRAMEF7Q5VXH5 474 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 COMTD1Q86VU5 262 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF321PQ8N8H1 164 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 GPR32P1Q8NGA4 272 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC35A4Q96G79 324 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 NUAK2Q9H093 628 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 LANCL2Q9NS86 450 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 TOR4AQ9NXH8 423 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 TVP23BQ9NYZ1 205 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 CHD8Q9HCK8 2581 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 NINQ8N4C6 2090 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 TFECO14948 347 aaPredicted RBP11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 CELA2AP08217 269 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 RAB40ALP0C0E4 278 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 UCNP55089 124 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 VBP1P61758 197 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 RPS7P62081 194 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 NCS1P62166 190 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 TUBA1BP68363 451 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 TIGD6Q17RP2 521 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 TUBA1AQ71U36 451 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF550Q7Z398 422 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR9Q2Q8NGE9 314 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF285Q96NJ3 590 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 SSR3Q9UNL2 185 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 SEC14L5O43304 696 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 UTS2O95399 124 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 HPP00738 406 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 OSMP13725 252 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 ENDOUP21128 410 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 PSMA1P25786 263 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 LSM3P62310 102 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZSWIM7Q19AV6 140 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 TYW3Q6IPR3 259 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 TMEM178AQ8NBL3 297 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR4N2Q8NGD1 307 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR8J1Q8NGP2 316 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 TMEM234Q8WY98 164 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 GGHQ92820 318 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 EVA1AQ9H8M9 152 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 DUSP22Q9NRW4 184 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF229Q9UJW7 825 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 CARD8Q9Y2G2 431 aa11.45□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR6C76A6NM76 312 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 RPL4P36578 427 aaKnown RBP11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC16A1P53985 500 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 RHAGQ02094 409 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 DUSP2Q05923 314 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 MCFD2Q8NI22 146 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 TMEM185BQ9H7F4 350 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 SEMA5BQ9P283 1151 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 RHCGQ9UBD6 479 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 CLDN24A6NM45 220 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 CLDN25C9JDP6 229 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 GKN3PP0CG01 181 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF12P17014 697 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 PGCP20142 388 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 RFC3P40938 356 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 RANBP1P43487 201 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 HOXC5Q00444 222 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 TEKQ02763 1124 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 MLC1Q15049 377 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF628Q5EBL2 1059 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 SPANXN2Q5MJ10 180 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 C19orf48Q6RUI8 117 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms