RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 SOWAHCQ53LP3 525 aaPredicted RBP20.22■□□□□ 0.83
PNKP-220ENST00000627232 PLBD1Q6P4A8 553 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 ARHGAP11AQ6P4F7 1023 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 PRSS58Q8IYP2 241 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 EID2Q8N6I1 236 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 TMCO5AQ8N6Q1 288 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 ZNF485Q8NCK3 441 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 FNDC8Q8TC99 324 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 STT3BQ8TCJ2 826 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 OR6C1Q96RD1 312 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 ARHGAP9Q9BRR9 750 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 LAT2Q9GZY6 243 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 TNFRSF10DQ9UBN6 386 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 PRR23D1E9PI22 279 aaPredicted RBP20.22■□□□□ 0.83
PNKP-220ENST00000627232 J3QRE1 110 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 PRKNO60260 465 aaPredicted RBP20.22■□□□□ 0.83
PNKP-220ENST00000627232 REM1O75628 298 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 NDUFB2O95178 105 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 APOL3O95236 402 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 PRR23D2P0DMB1 279 aaPredicted RBP20.22■□□□□ 0.83
PNKP-220ENST00000627232 PEPDP12955 493 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 IL12BP29460 328 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 RPS3AP61247 264 aaKnown RBP20.22■□□□□ 0.83
PNKP-220ENST00000627232 ACSM1Q08AH1 577 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 MFSD4AQ8N468 514 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 ZNF441Q8N8Z8 693 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 OR4F15Q8NGB8 312 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 OR52N1Q8NH53 320 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 CCDC74BQ96LY2 380 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 TMEM43Q9BTV4 400 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 RNF167Q9H6Y7 350 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 C12orf10Q9HB07 376 aa20.22■□□□□ 0.83
PNKP-220ENST00000627232 SDK1Q7Z5N4 2213 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 SLC22A31A6NKX4 558 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 J3QRK9 145 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 CER1O95813 267 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 IFNGP01579 166 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 TSPAN19P0C672 248 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 ZNF3P17036 446 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 PAICSP22234 425 aaKnown RBP20.21■□□□□ 0.83
PNKP-220ENST00000627232 IDUAP35475 653 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 SOX6P35712 828 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 SLC6A8P48029 635 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 NR0B1P51843 470 aaKnown RBP20.21■□□□□ 0.83
PNKP-220ENST00000627232 PNLIPRP2P54317 469 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 ANKDD1AQ495B1 522 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 NKAIN1Q4KMZ8 207 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 SLC35F1Q5T1Q4 408 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 OR2G6Q5TZ20 316 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 APOOLQ6UXV4 268 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 SHFQ7M4L6 423 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 KLHL36Q8N4N3 616 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 GATSQ8NAP1 163 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 ADOQ96SZ5 270 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 PHOX2BQ99453 314 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 CDADC1Q9BWV3 514 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 ERVK13-1Q9NX77 482 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 SSR3Q9UNL2 185 aa20.21■□□□□ 0.83
PNKP-220ENST00000627232 SPIN1Q9Y657 262 aaPredicted RBP20.21■□□□□ 0.83
PNKP-220ENST00000627232 FAM183AA6NL82 134 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ELOA3DA6NLF2 546 aaPredicted RBP20.2■□□□□ 0.82
PNKP-220ENST00000627232 OIP5O43482 229 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ICOSLGO75144 302 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 SCRG1O75711 98 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 OR7A10O76100 309 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 PPP1R3DO95685 299 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 BMP4P12644 408 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ZNF12P17014 697 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ATP6V1E1P36543 226 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 RAB15P59190 212 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ITGADQ13349 1161 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ELOA3BQ3SY89 546 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ZNF362Q5T0B9 420 aaPredicted RBP20.2■□□□□ 0.82
PNKP-220ENST00000627232 LIPKQ5VXJ0 399 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ATG4DQ86TL0 474 aaPredicted RBP20.2■□□□□ 0.82
PNKP-220ENST00000627232 IGFN1Q86VF2 1251 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 SLC37A3Q8NCC5 494 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ELOA3Q8NG57 546 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ZNF649Q9BS31 505 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 EXOSC4Q9NPD3 245 aaKnown RBP20.2■□□□□ 0.82
PNKP-220ENST00000627232 KLHL21Q9UJP4 597 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 ZNF337Q9Y3M9 751 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 SEC16AO15027 2179 aa20.2■□□□□ 0.82
PNKP-220ENST00000627232 PLCXD2Q0VAA5 305 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 INAQ16352 499 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 LANCL3Q6ZV70 420 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 BPHLQ86WA6 291 aaPredicted RBP20.19■□□□□ 0.82
PNKP-220ENST00000627232 LIPHQ8WWY8 451 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 GATAD2BQ8WXI9 593 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 TM9SF4Q92544 642 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 UFD1Q92890 307 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 PTP4A1Q93096 173 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 OTULINQ96BN8 352 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 INPP5EQ9NRR6 644 aa20.19■□□□□ 0.82
PNKP-220ENST00000627232 CCDC182A6NF36 153 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 ALG1L2C9J202 215 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 ZNF670-ZNF695F2Z2N8 137 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 GNB5O14775 395 aa20.18■□□□□ 0.82
PNKP-220ENST00000627232 EIF4E2O60573 245 aaKnown RBP20.18■□□□□ 0.82
PNKP-220ENST00000627232 SLC2A5P22732 501 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms