RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 SLC22A11Q9NSA0 550 aa14.09□□□□□ -0.15
PMS1-221ENST00000624204 SPEGQ15772 3267 aa14.08□□□□□ -0.15
PMS1-221ENST00000624204 PLXND1Q9Y4D7 1925 aa14.08□□□□□ -0.15
PMS1-221ENST00000624204 NPC1O15118 1278 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 FGBP02675 491 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 TYRP14679 529 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 MAT1AQ00266 395 aaKnown RBP14.08□□□□□ -0.16
PMS1-221ENST00000624204 MAPK14Q16539 360 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 HFEQ30201 348 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 TMEM220Q6QAJ8 160 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 SLC16A13Q7RTY0 426 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 SERINC5Q86VE9 423 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 GID4Q8IVV7 300 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 BRIX1Q8TDN6 353 aaKnown RBP14.08□□□□□ -0.16
PMS1-221ENST00000624204 OTUB2Q96DC9 234 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 CRB3Q9BUF7 120 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 ZNF254O75437 659 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 CSN2P05814 226 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 HOXC8P31273 242 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 ART1P52961 327 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 PRMT2P55345 433 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 SNRPD1P62314 119 aaKnown RBP14.08□□□□□ -0.16
PMS1-221ENST00000624204 ARL14Q8N4G2 192 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 C12orf45Q8N5I9 185 aaPredicted RBP14.08□□□□□ -0.16
PMS1-221ENST00000624204 SCLYQ96I15 445 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 DPH1Q9BZG8 443 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 TMEM185BQ9H7F4 350 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 FKRPQ9H9S5 495 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 FBXL4Q9UKA2 621 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 ZMIZ1Q9ULJ6 1067 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 TRBV23-1A0A0A0MS06 115 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 KCNAB3O43448 404 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 GSTZ1O43708 216 aaPredicted RBP14.08□□□□□ -0.16
PMS1-221ENST00000624204 CALCRP30988 508 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 PSMB10P40306 273 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 NAA10P41227 235 aaPredicted RBP14.08□□□□□ -0.16
PMS1-221ENST00000624204 STX4Q12846 297 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 TDGQ13569 410 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 CCDC157Q569K6 752 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 PRPF38BQ5VTL8 546 aaKnown RBP14.08□□□□□ -0.16
PMS1-221ENST00000624204 HSD11B1LQ7Z5J1 315 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 PUSL1Q8N0Z8 303 aaKnown RBP14.08□□□□□ -0.16
PMS1-221ENST00000624204 RASGEF1AQ8N9B8 481 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 PNPLA2Q96AD5 504 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 C10orf90Q96M02 699 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 CAMK1GQ96NX5 476 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 ZNF559Q9BR84 538 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 TMEM231Q9H6L2 316 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 FBXL3Q9UKT7 428 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 KCNE3Q9Y6H6 103 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 DOCK3Q8IZD9 2030 aa14.08□□□□□ -0.16
PMS1-221ENST00000624204 KIAA1671Q9BY89 1806 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 HTTP42858 3142 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 HMSDA8MTL9 139 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 FAM25EA8MYX2 175 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 NOS3P29474 1203 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 NCBP2P52298 156 aaKnown RBP eCLIP14.07□□□□□ -0.165e-8■■■□□ 15.7
PMS1-221ENST00000624204 UBE2IP63279 158 aaKnown RBP14.07□□□□□ -0.16
PMS1-221ENST00000624204 GUCA2BQ16661 112 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 UBE2NLQ5JXB2 153 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 TMEM69Q5SWH9 247 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 Q6ZVU0 165 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 TMEM173Q86WV6 379 aaPredicted RBP14.07□□□□□ -0.16
PMS1-221ENST00000624204 C16orf58Q96GQ5 468 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 LYSMD1Q96S90 227 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 FN3KQ9H479 309 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 ENTPD4Q9Y227 616 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 NAP1L6A6NFF2 107 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 HMGN2P05204 90 aaKnown RBP14.07□□□□□ -0.16
PMS1-221ENST00000624204 SPP1P10451 314 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 CD70P32970 193 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 GPNMBQ14956 572 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 ZC3H14Q6PJT7 736 aaKnown RBP14.07□□□□□ -0.16
PMS1-221ENST00000624204 BAIAP2L2Q6UXY1 529 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 CHST14Q8NCH0 376 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 OR52L1Q8NGH7 329 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 OR51A7Q8NH64 312 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 SUN3Q8TAQ9 357 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 PGLYRP3Q96LB9 341 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 BBS4Q96RK4 519 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 OR52D1Q9H346 318 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 SYNPO2LQ9H987 977 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 MED17Q9NVC6 651 aa14.07□□□□□ -0.16
PMS1-221ENST00000624204 GABARAPH6UMI1 98 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 CACNB4O00305 520 aaPredicted RBP14.06□□□□□ -0.16
PMS1-221ENST00000624204 ARL6IP5O75915 188 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 C1orf105O95561 183 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 FABP1P07148 127 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 BMP7P18075 431 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 FPR3P25089 353 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 LMAN2Q12907 356 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 TRAM1Q15629 374 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 PXKQ7Z7A4 578 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 TMED4Q7Z7H5 227 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 RNF180Q86T96 592 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 ASPGQ86U10 573 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 ACOT11Q8WXI4 607 aaPredicted RBP14.06□□□□□ -0.16
PMS1-221ENST00000624204 DNAJA3Q96EY1 480 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 MCHR1Q99705 422 aa14.06□□□□□ -0.16
PMS1-221ENST00000624204 PDCD1LG2Q9BQ51 273 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms