RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 RPL13AP40429 203 aaKnown RBP3.65□□□□□ -1.83
CPNE3-213ENST00000622183 LEPP41159 167 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 MAGEA8P43361 318 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 RPL23AP62750 156 aaKnown RBP3.65□□□□□ -1.83
CPNE3-213ENST00000622183 CHRNB3Q05901 458 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 SLC10A7Q0GE19 358 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 SLC1A5Q15758 541 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 LRRC36Q1X8D7 754 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 BOLA3Q53S33 107 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 PHYHD1Q5SRE7 291 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 C1orf220Q5T0J3 134 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 PDZK1Q5T2W1 519 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 ZNF658Q5TYW1 1059 aaPredicted RBP3.65□□□□□ -1.83
CPNE3-213ENST00000622183 FRA10AC1Q70Z53 315 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 P2RY8Q86VZ1 359 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 SKA3Q8IX90 412 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 GPD1LQ8N335 351 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 OR2L13Q8N349 312 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 ATP6V0D2Q8N8Y2 350 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 PAQR8Q8TEZ7 354 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 MAIP1Q8WWC4 291 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 SLC38A2Q96QD8 506 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 FANCFQ9NPI8 374 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 PHF11Q9UIL8 331 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 PRPF19Q9UMS4 504 aaKnown RBP3.65□□□□□ -1.83
CPNE3-213ENST00000622183 CA5BQ9Y2D0 317 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 PLLPQ9Y342 182 aa3.65□□□□□ -1.83
CPNE3-213ENST00000622183 IGHV7-81A0A0B4J1V7 117 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 IGKV3D-20A0A0C4DH25 116 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 VSTM2BA6NLU5 285 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 POLR2DO15514 142 aaKnown RBP3.64□□□□□ -1.83
CPNE3-213ENST00000622183 TIMM8AO60220 97 aaPredicted RBP3.64□□□□□ -1.83
CPNE3-213ENST00000622183 OR10H3O60404 316 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 PFKFB2O60825 505 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 DIRAS1O95057 198 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 LYPD3O95274 346 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 NCK1P16333 377 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 COX5AP20674 150 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 GCAP28676 217 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 RIPK4P57078 832 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 KLRB1Q12918 225 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 AANATQ16613 207 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 ATL3Q6DD88 541 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 DNM1P46Q6ZS02 220 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 MOB1BQ7L9L4 216 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 ZNF677Q86XU0 584 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 SCFD1Q8WVM8 642 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 ANKRD9Q96BM1 317 aaPredicted RBP3.64□□□□□ -1.83
CPNE3-213ENST00000622183 FGGYQ96C11 551 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 SLC25A38Q96DW6 304 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 MTMR9Q96QG7 549 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 CCNL2Q96S94 520 aaPredicted RBP3.64□□□□□ -1.83
CPNE3-213ENST00000622183 COPS8Q99627 209 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 TCHPQ9BT92 498 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 Q9H3A6 140 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 ZNF702PQ9H963 129 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 ZNF275Q9NSD4 429 aaPredicted RBP3.64□□□□□ -1.83
CPNE3-213ENST00000622183 ONECUT1Q9UBC0 465 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 KLHL21Q9UJP4 597 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 MOKQ9UQ07 419 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 HCFC1P51610 2035 aa3.64□□□□□ -1.83
CPNE3-213ENST00000622183 KANK1Q14678 1352 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 RPAP1Q9BWH6 1393 aaPredicted RBP3.63□□□□□ -1.83
CPNE3-213ENST00000622183 IGHV1OR15-1A0A075B7D0 117 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 A0A0U1RQS6 177 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 H0Y8G0 127 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 KIF2AO00139 706 aaPredicted RBP3.63□□□□□ -1.83
CPNE3-213ENST00000622183 PHOX2AO14813 284 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 RAMP3O60896 148 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 LYPLA1O75608 230 aaPredicted RBP3.63□□□□□ -1.83
CPNE3-213ENST00000622183 SERF1AO75920 110 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 SLITRK3O94933 977 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 AP2A1O95782 977 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 SEMG1P04279 462 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 CCDC130P13994 396 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 HOXD10P28358 340 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 UGT1A5P35504 534 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 PTGDSP41222 190 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 SULT1E1P49888 294 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 DUSP3P51452 185 aaPredicted RBP3.63□□□□□ -1.83
CPNE3-213ENST00000622183 PLK1P53350 603 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 CRYBB1P53674 252 aaPredicted RBP3.63□□□□□ -1.83
CPNE3-213ENST00000622183 SEC61GP60059 68 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 RPS14P62263 151 aaKnown RBP3.63□□□□□ -1.83
CPNE3-213ENST00000622183 BCL2L1Q07817 233 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 Q6ZR54 194 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 TRPM8Q7Z2W7 1104 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 LYG1Q8N1E2 194 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 CD177Q8N6Q3 437 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 FAM83FQ8NEG4 500 aaPredicted RBP3.63□□□□□ -1.83
CPNE3-213ENST00000622183 HTR3CQ8WXA8 447 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 FBXO32Q969P5 355 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 RNF126Q9BV68 326 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 RAB34Q9BZG1 259 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 YY1AP1Q9H869 796 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 RPS10P5Q9NQ39 176 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 VNN3Q9NY84 501 aa3.63□□□□□ -1.83
CPNE3-213ENST00000622183 A0A1B0GUS0 222 aa3.62□□□□□ -1.83
CPNE3-213ENST00000622183 IDSB3KWA1 339 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms