RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 WBP2NLQ6ICG8 309 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF420Q8TAQ5 688 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-213ENST00000620219 GPA33Q99795 319 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 GABARAPL3Q9BY60 117 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 C19orf67A6NJJ6 358 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 PGGHGQ32M88 737 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 BORAQ6PGQ7 559 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 QSOX2Q6ZRP7 698 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 PRSS42Q7Z5A4 293 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 APH1BQ8WW43 257 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 MUL1Q969V5 352 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 KCNS3Q9BQ31 491 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 GALNT9Q9HCQ5 603 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 SNTG1Q9NSN8 517 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 C20orf141Q9NUB4 165 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 PSORS1C1Q9UIG5 152 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 GSTK1Q9Y2Q3 226 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 ATG2AQ2TAZ0 1938 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 CSO75390 466 aaKnown RBP14.45□□□□□ -0.1
CPSF1-213ENST00000620219 PPM1BO75688 479 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 STK17BO94768 372 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 NDUFB2O95178 105 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 CT45A8P0DMV1 189 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 CT45A9P0DMV2 189 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 LIPAP38571 399 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 AQP2P41181 271 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 TMBIM6P55061 237 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 CT45A2Q5DJT8 189 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 MEDAGQ5VYS4 303 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 OR1N1Q8NGS0 311 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 BRD7Q9NPI1 651 aa14.45□□□□□ -0.1
CPSF1-213ENST00000620219 H7C1C5 153 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 LCN6P62502 163 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 SLC3A1Q07837 685 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 SPHARQ15513 63 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 YOD1Q5VVQ6 348 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-213ENST00000620219 SNX29P2Q8IUI4 249 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 LRRC17Q8N6Y2 441 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 TUBA1CQ9BQE3 449 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 DUSP21Q9H596 190 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 GPR27Q9NS67 375 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 MUC22E2RYF6 1773 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-213ENST00000620219 RAB36O95755 333 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 CDK1P06493 297 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 RBMS1P29558 406 aaKnown RBP14.44□□□□□ -0.1
CPSF1-213ENST00000620219 TUBA3CQ13748 450 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 SHBQ15464 509 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 OR2G6Q5TZ20 316 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 COMMD2Q86X83 199 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 FCGR1BQ92637 280 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 ZC3H12DA2A288 527 aaKnown RBP14.44□□□□□ -0.1
CPSF1-213ENST00000620219 CASKO14936 926 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 SEC14L5O43304 696 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 IGKV1D-16P01601 117 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 ABCD3P28288 659 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 LEG1Q6P5S2 330 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 LUZP2Q86TE4 346 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 KIAA1143Q96AT1 154 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-213ENST00000620219 ASPNQ9BXN1 380 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 UBQLN3Q9H347 655 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 HHATLQ9HCP6 504 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 FLRT3Q9NZU0 649 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 ZNF229Q9UJW7 825 aa14.44□□□□□ -0.1
CPSF1-213ENST00000620219 SEC14L2O76054 403 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 ALG10Q5BKT4 473 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 DEFB124Q8NES8 71 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 KBTBD8Q8NFY9 601 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 ABCB10Q9NRK6 738 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 DKKL1Q9UK85 242 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 SOCS6O14544 535 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 PRKAR1AP10644 381 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 CDK4P11802 303 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 DCKP27707 260 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 EIF1AXP47813 144 aaKnown RBP14.43□□□□□ -0.1
CPSF1-213ENST00000620219 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.43□□□□□ -0.1
CPSF1-213ENST00000620219 RASSF6Q6ZTQ3 369 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 OVCH1Q7RTY7 1134 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 C9orf43Q8TAL5 461 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-213ENST00000620219 ARHGDIGQ99819 225 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 RSPO3Q9BXY4 272 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-213ENST00000620219 CDCP1Q9H5V8 836 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 MUC6Q6W4X9 2439 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 CHP2O43745 196 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 ZIC2O95409 532 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-213ENST00000620219 RECKO95980 971 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 RENP00797 406 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 CBFBQ13951 182 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 BICRALQ6AI39 1079 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 FAM220AQ7Z4H9 259 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 KLHL36Q8N4N3 616 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 SYT14Q8NB59 555 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 MND1Q9BWT6 205 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 OR11A1Q9GZK7 315 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 CLEC4AQ9UMR7 237 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 PCDH15Q96QU1 1955 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 IRGMA1A4Y4 181 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 VSTM2BA6NLU5 285 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 ZAR1LA6NP61 321 aa14.43□□□□□ -0.1
CPSF1-213ENST00000620219 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-213ENST00000620219 MASP2O00187 686 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms