RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ACTL6AO96019 429 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 SEMG1P04279 462 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 PEPDP12955 493 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 POU3F2P20265 443 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 CXCR1P25024 350 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 TAS2R41P59536 307 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 CHRNB3Q05901 458 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 FOXD4Q12950 439 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 FAM98BQ52LJ0 330 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 NHSL2Q5HYW2 709 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 DCST1Q5T197 706 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 VASNQ6EMK4 673 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 ZNF613Q6PF04 617 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 ULK3Q6PHR2 472 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 FGD2Q7Z6J4 655 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 TSEN54Q7Z6J9 526 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 ADGRG5Q8IZF4 528 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 ADAMTS16Q8TE57 1224 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 CANT1Q8WVQ1 401 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 DNAJA4Q8WW22 397 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 SMPDL3BQ92485 455 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 POP5Q969H6 163 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 TIMP4Q99727 224 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 TMEM185BQ9H7F4 350 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 SERINC1Q9NRX5 453 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 SELENONQ9NZV5 590 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 ACAD8Q9UKU7 415 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 AURKCQ9UQB9 309 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 TMED7Q9Y3B3 224 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 FAM32AQ9Y421 112 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 NBEAQ8NFP9 2946 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 COL6A6A6NMZ7 2263 aa14.1□□□□□ -0.15
PCDHGC3-204ENST00000617222 NCKAP5O14513 1909 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 DHRS12A0PJE2 317 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 TMEM72A0PK05 275 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 TRAPPC13A5PLN9 417 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 THY1P04216 161 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 FABP3P05413 133 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 UMPSP11172 480 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 ELK4P28324 431 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 PTGS2P35354 604 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 LHX2P50458 406 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 CDH12P55289 794 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 RAC1P63000 192 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 VLDLRP98155 873 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 SRYQ05066 204 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 CRYZQ08257 329 aaKnown RBP14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 CCNIQ14094 377 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 ALG10BQ5I7T1 473 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 ATG4DQ86TL0 474 aaPredicted RBP14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 ZDHHC21Q8IVQ6 265 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 CHERPQ8IWX8 916 aaKnown RBP14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 LILRA2Q8N149 483 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 SARAFQ96BY9 339 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 SLC41A3Q96GZ6 507 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 RSRC1Q96IZ7 334 aaKnown RBP14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 ZNF300Q96RE9 604 aaPredicted RBP14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 MAGIXQ9H6Y5 334 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 IL1RAPQ9NPH3 570 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 NDUFAF4Q9P032 175 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 CHRNA9Q9UGM1 479 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 RIMS3Q9UJD0 308 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 A4GNTQ9UNA3 340 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 AP4B1Q9Y6B7 739 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 BOD1L1Q8NFC6 3051 aa14.09□□□□□ -0.15
PCDHGC3-204ENST00000617222 BSNQ9UPA5 3926 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 MED12Q93074 2177 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 OR14I1A6ND48 311 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 ELOA3DA6NLF2 546 aaPredicted RBP14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 FFAR1O14842 300 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 SEC14L5O43304 696 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 DIRAS1O95057 198 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 OR5F1O95221 314 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 LYPD3O95274 346 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 MT-ND1P03886 318 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 GPIP06744 558 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 ITGA2P17301 1181 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 SHC1P29353 583 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 IFNA8P32881 189 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 SFTPDP35247 375 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 SUCLG1P53597 346 aaKnown RBP14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 CLDN20P56880 219 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 TLE1Q04724 770 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 SELENBP1Q13228 472 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 KPNB1Q14974 876 aaKnown RBP14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 C3AR1Q16581 482 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 ELOA3BQ3SY89 546 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 TMEM176BQ3YBM2 270 aaPredicted RBP14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 IQCCQ4KMZ1 466 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 GDF7Q7Z4P5 450 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 CYP4Z1Q86W10 505 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 UBQLNLQ8IYU4 475 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 ST6GALNAC3Q8NDV1 305 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 ELOA3Q8NG57 546 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 OR5M9Q8NGP3 310 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 SLC38A4Q969I6 547 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 WDYHV1Q96HA8 205 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 PRRC1Q96M27 445 aa14.08□□□□□ -0.16
PCDHGC3-204ENST00000617222 FNDC11Q9BVV2 318 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms