RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 PSD4Q8NDX1 1056 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 TANKQ92844 425 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 C12orf43Q96C57 262 aaKnown RBP4.53□□□□□ -1.68
SYCP1-209ENST00000613524 PPP1R14BQ96C90 147 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 SMIM10Q96HG1 83 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 SLC6A15Q9H2J7 730 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 GLIPR2Q9H4G4 154 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 CXorf21Q9HAI6 301 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 CTPS2Q9NRF8 586 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 DEPPQ9NTK1 212 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 FAIMQ9NVQ4 179 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 ABCA2Q9BZC7 2435 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 C1orf226A1L170 272 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 SAC3D1A6NKF1 404 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 H0YC42 278 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 LSM1O15116 133 aaKnown RBP4.53□□□□□ -1.68
SYCP1-209ENST00000613524 PTP4A3O75365 173 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 ICAM2P13598 275 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 TPD52P55327 224 aaPredicted RBP4.53□□□□□ -1.68
SYCP1-209ENST00000613524 LRRC74AQ0VAA2 488 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 MFAP5Q13361 173 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 PMS2P3Q13401 168 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 TMED1Q13445 227 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 ATP6AP1Q15904 470 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 EXT1Q16394 746 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 SPIN4Q56A73 249 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 KRT80Q6KB66 452 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 SLC48A1Q6P1K1 146 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 MTFR2Q6P444 385 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 TMEM205Q6UW68 189 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 ZNF554Q86TJ5 538 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 CLVS1Q8IUQ0 354 aaPredicted RBP4.53□□□□□ -1.68
SYCP1-209ENST00000613524 SLC15A3Q8IY34 581 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 ADGRG5Q8IZF4 528 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 SMYD1Q8NB12 490 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 OR4A15Q8NGL6 344 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 ABTB1Q969K4 478 aaPredicted RBP4.53□□□□□ -1.68
SYCP1-209ENST00000613524 ROPN1LQ96C74 230 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 ZNF354BQ96LW1 612 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 ROGDIQ9GZN7 287 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 SLC26A1Q9H2B4 701 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 DDX31Q9H8H2 851 aaKnown RBP4.53□□□□□ -1.68
SYCP1-209ENST00000613524 PLGRKTQ9HBL7 147 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 TBCCD1Q9NVR7 557 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 CMTM6Q9NX76 183 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 MKLN1Q9UL63 735 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 EIF3LQ9Y262 564 aaKnown RBP4.53□□□□□ -1.68
SYCP1-209ENST00000613524 LIPGQ9Y5X9 500 aa4.53□□□□□ -1.68
SYCP1-209ENST00000613524 SONP18583 2426 aaKnown RBP4.52□□□□□ -1.69
SYCP1-209ENST00000613524 IGLV3-12A0A075B6K2 115 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 A0A087WXM4 84 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 TRAV17A0A0B4J275 112 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 A0A1W2PRB8 838 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 H3BMQ9 156 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 SLC28A1O00337 649 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 CCL21O00585 134 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 PCDH17O14917 1159 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 UGT2B11O75310 529 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 ERN1O75460 977 aaKnown RBP4.52□□□□□ -1.69
SYCP1-209ENST00000613524 CLIC3O95833 236 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 IGHEP01854 428 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 HSD17B1P14061 328 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 DCKP27707 260 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 NOS3P29474 1203 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 MPIP34949 423 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 ZFP36L2P47974 494 aaKnown RBP4.52□□□□□ -1.69
SYCP1-209ENST00000613524 NUP107P57740 925 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 PPIAP62937 165 aaKnown RBP4.52□□□□□ -1.69
SYCP1-209ENST00000613524 MERTKQ12866 999 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 CRB2Q5IJ48 1285 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 LCE2CQ5TA81 110 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 LCN8Q6JVE9 175 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 SLC30A6Q6NXT4 461 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 LYPD4Q6UWN0 246 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 BEND4Q6ZU67 534 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 GPR141Q7Z602 305 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 IFNEQ86WN2 208 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 SPPL2CQ8IUH8 684 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 CCDC71Q8IV32 467 aaPredicted RBP4.52□□□□□ -1.69
SYCP1-209ENST00000613524 CROCCP3Q8IVE0 287 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 LINC00346Q8IVM7 164 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 GCNT2Q8N0V5 402 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 SLC16A11Q8NCK7 471 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 TBC1D15Q8TC07 691 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 SNRNP27Q8WVK2 155 aaKnown RBP4.52□□□□□ -1.69
SYCP1-209ENST00000613524 FBXL20Q96IG2 436 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 IP6K3Q96PC2 410 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 INPP5KQ9BT40 448 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 WWTR1Q9GZV5 400 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 LYARQ9NX58 379 aaKnown RBP4.52□□□□□ -1.69
SYCP1-209ENST00000613524 MS4A12Q9NXJ0 267 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 MAT2BQ9NZL9 334 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 MED11Q9P086 117 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 SEC14L3Q9UDX4 400 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 CLEC4AQ9UMR7 237 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 CLDN16Q9Y5I7 305 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 KCNE3Q9Y6H6 103 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 ASPDHA6ND91 283 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 CLDN24A6NM45 220 aa4.52□□□□□ -1.69
SYCP1-209ENST00000613524 FOXE1O00358 373 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms