RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 DNAJA4Q8WW22 397 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 SEMA6CQ9H3T2 930 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 MED17Q9NVC6 651 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 UNC13CQ8NB66 2214 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A087WV48 116 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 MCIDASD6RGH6 385 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 PTP4A3O75365 173 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 HLA-DPB1P04440 258 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 MYF5P13349 255 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 DRD5P21918 477 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 RP1P56715 2156 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF85Q03923 595 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 GAS6Q14393 721 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 ATAD3CQ5T2N8 411 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR5W2Q8NH69 310 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 MMABQ96EY8 250 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 ERMAPQ96PL5 475 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 ORAI3Q9BRQ5 295 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 ADGRL4Q9HBW9 690 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 CMC2Q9NRP2 79 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 BABAM2Q9NXR7 383 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 KIR2DS5A0A0G2JLQ3 304 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A0G2JNG1 304 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A1W2PRG6 482 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 MEIOCA2RUB1 952 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 KIR2DS3K7RE56 304 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 OIP5O43482 229 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 IFNA16P05015 189 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 HIST1H1CP16403 213 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 GRPRP30550 384 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 SCN1BQ07699 218 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 KIR2DS5Q14953 304 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 CCDC92Q53HC0 331 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 RNASE12Q5GAN4 147 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 XKRXQ6PP77 449 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 TMPRSS11FQ6ZWK6 438 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 Q8N402 240 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR6F1Q8NGZ6 308 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR52N1Q8NH53 320 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 C16orf52Q8NHV5 167 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 VSTM2LQ96N03 204 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 TGM7Q96PF1 710 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 MED18Q9BUE0 208 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 SPRTNQ9H040 489 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 KRCC1Q9NPI7 259 aaPredicted RBP12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 NUFIP1Q9UHK0 495 aaKnown RBP12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 PCDHGB2Q9Y5G2 931 aa12.96□□□□□ -0.33
PCDHGA3-202ENST00000612467 TP53BP1Q12888 1972 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 COL6A3P12111 3177 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 TFP02787 698 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 CT45A8P0DMV1 189 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 CT45A9P0DMV2 189 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 ELK1P19419 428 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 IGFBP4P22692 258 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 MAGEB1P43366 347 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 RAB25P57735 213 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 IFITM2Q01629 132 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 CCDC85BQ15834 202 aaPredicted RBP12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 CT45A2Q5DJT8 189 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 OTPQ5XKR4 325 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 FAAH2Q6GMR7 532 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 PAMR1Q6UXH9 720 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 CDK20Q8IZL9 346 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 FAM181AQ8N9Y4 354 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 OR4C6Q8NH72 309 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 LMX1AQ8TE12 382 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 UBASH3BQ8TF42 649 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 SMPDL3BQ92485 455 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 KLHDC7BQ96G42 594 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 NEK6Q9HC98 313 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 ISYNA1Q9NPH2 558 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 KLHL1Q9NR64 748 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 EML5Q05BV3 1969 aa12.96□□□□□ -0.34
PCDHGA3-202ENST00000612467 MN1Q10571 1320 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 FAM86C2PA6NEL3 165 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 FAM25AB3EWG3 89 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 FAM25CB3EWG5 89 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 FAM25GB3EWG6 89 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 SBK2P0C263 348 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 PYCR1P32322 319 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 DEFB133Q30KQ1 61 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 RAB43Q86YS6 212 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 CHAC2Q8WUX2 184 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 FYTTD1Q96QD9 318 aaKnown RBP12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 PPP1R3EQ9H7J1 279 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 PRTFDC1Q9NRG1 225 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 DDX28Q9NUL7 540 aaKnown RBP12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 IER3IP1Q9Y5U9 82 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 IGHV5-51A0A0C4DH38 117 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 A0A0G2JMP0 313 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 A0A0X1KG70 313 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 IDSB3KWA1 339 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 B4DXG7 233 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 CHP2O43745 196 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 LANCL1O43813 399 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 RCBTB2O95199 551 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 SLC25A35Q3KQZ1 300 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 GID4Q8IVV7 300 aa12.95□□□□□ -0.34
PCDHGA3-202ENST00000612467 TMEM151BQ8IW70 566 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms