RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 KRTAP1-1Q07627 177 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 VEZF1Q14119 521 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 STK11Q15831 433 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 PDCD2Q16342 344 aaPredicted RBP15.72■□□□□ 0.11
SSBP1-215ENST00000612337 MAPK14Q16539 360 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 PGGHGQ32M88 737 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 SYT14P1Q58G82 188 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 WDR93Q6P2C0 686 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 EMBQ6PCB8 327 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 ZNF781Q8N8C0 355 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 FAM71CQ8NEG0 241 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 MUCL1Q96DR8 90 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 POLE3Q9NRF9 147 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 LIPT1Q9Y234 373 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 SLC35A3Q9Y2D2 325 aa15.72■□□□□ 0.11
SSBP1-215ENST00000612337 IGKV3D-15A0A087WSY6 115 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 PRSS51A0A1B0GVH4 220 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 RNF223E7ERA6 249 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 SULT2B1O00204 365 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 ITM2AO43736 263 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 PGM3O95394 542 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 THBS1P07996 1170 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 OR12D1P0DN82 309 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 GGT1P19440 569 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 UQCRC2P22695 453 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 IGHV1-2P23083 117 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 CDKN1AP38936 164 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 APOBEC1P41238 236 aaKnown RBP15.71■□□□□ 0.11
SSBP1-215ENST00000612337 CASP9P55211 416 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 PDK3Q15120 406 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 TIMM23BQ5SRD1 257 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 ATAD3BQ5T9A4 648 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 ANXA8L1Q5VT79 327 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 AP1ARQ63HQ0 302 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 ABLIM2Q6H8Q1 611 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 TYW3Q6IPR3 259 aaKnown RBP15.71■□□□□ 0.11
SSBP1-215ENST00000612337 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.71■□□□□ 0.11
SSBP1-215ENST00000612337 MTDHQ86UE4 582 aaKnown RBP15.71■□□□□ 0.11
SSBP1-215ENST00000612337 P2RY8Q86VZ1 359 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 ZNF100Q8IYN0 542 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 PKNOX2Q96KN3 472 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 PPP1R36Q96LQ0 422 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 TMEM109Q9BVC6 243 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 CCDC106Q9BWC9 280 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 DPY30Q9C005 99 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 EMC3Q9P0I2 261 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 WDR45Q9Y484 360 aa15.71■□□□□ 0.11
SSBP1-215ENST00000612337 SPIN1Q9Y657 262 aaPredicted RBP15.71■□□□□ 0.11
SSBP1-215ENST00000612337 CUBNO60494 3623 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 ANKRD28O15084 1053 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 SERPINE1P05121 402 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 MYZAPP0CAP1 466 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 PHC1P78364 1004 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 SAXO2Q658L1 398 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 TNFAIP8L2Q6P589 184 aaPredicted RBP15.7■□□□□ 0.1
SSBP1-215ENST00000612337 ANKRD46Q86W74 232 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 VPS37AQ8NEZ2 397 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 ZNF563Q8TA94 476 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 XAGE5Q8WWM1 108 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 TESCQ96BS2 214 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 MDFIQ99750 246 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 TRAF4Q9BUZ4 470 aaPredicted RBP15.7■□□□□ 0.1
SSBP1-215ENST00000612337 REG4Q9BYZ8 158 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 GRIP2Q9C0E4 1043 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 SAP130Q9H0E3 1048 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 SLCO5A1Q9H2Y9 848 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 ALG2Q9H553 416 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 CISD1Q9NZ45 108 aaKnown RBP15.7■□□□□ 0.1
SSBP1-215ENST00000612337 CHRNA9Q9UGM1 479 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.7■□□□□ 0.1
SSBP1-215ENST00000612337 RAP2CQ9Y3L5 183 aa15.7■□□□□ 0.1
SSBP1-215ENST00000612337 MXRA5Q9NR99 2828 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 CR1P17927 2039 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 CHD3Q12873 2000 aaKnown RBP15.69■□□□□ 0.1
SSBP1-215ENST00000612337 GOLGA8QA0A0J9YX86 632 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 WDR91A4D1P6 747 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 GOLGA8OA6NCC3 632 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 OR5H1A6NKK0 313 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 SHISA9B4DS77 424 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 GOLGA8NF8WBI6 632 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 BIRC5O15392 142 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 RAMP1O60894 148 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 BCAS1O75363 584 aaPredicted RBP15.69■□□□□ 0.1
SSBP1-215ENST00000612337 CRLF1O75462 422 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 CPSF4O95639 269 aaKnown RBP15.69■□□□□ 0.1
SSBP1-215ENST00000612337 IGHV4-39P01824 125 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 TFPIP10646 304 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 FKBP2P26885 142 aaKnown RBP15.69■□□□□ 0.1
SSBP1-215ENST00000612337 ACVR1BP36896 505 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 ABCE1P61221 599 aaKnown RBP15.69■□□□□ 0.1
SSBP1-215ENST00000612337 FUT5Q11128 374 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 FAPQ12884 760 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 CHI3L2Q15782 390 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 FBXW9Q5XUX1 488 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 FRRS1Q6ZNA5 592 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 DNM1P46Q6ZS02 220 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 GRINAQ7Z429 371 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 DTX2Q86UW9 622 aa15.69■□□□□ 0.1
SSBP1-215ENST00000612337 ZNF433Q8N7K0 673 aaPredicted RBP15.69■□□□□ 0.1
SSBP1-215ENST00000612337 MAPK1IP1LQ8NDC0 245 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms