RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 SLC10A7Q0GE19 358 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 EFEMP1Q12805 493 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 COTL1Q14019 142 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 DHCR24Q15392 516 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 HYAL4Q2M3T9 481 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 ZNF805Q5CZA5 627 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 SLC22A10Q63ZE4 541 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 TPRA1Q86W33 373 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 NFKBIDQ8NI38 313 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 ISG20L2Q9H9L3 353 aaKnown RBP11.04□□□□□ -0.64
CTCFL-217ENST00000608425 UQCC1Q9NVA1 299 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 MARCH2Q9P0N8 246 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 TRAV14DV4A0A0A6YYC5 116 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 TMEM272A0A1B0GTI8 110 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 LRRN3E7EW58 273 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 F5H5P2 479 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 APBB3O95704 486 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 TXNDC12O95881 172 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 MMP2P08253 660 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 TIMP2P16035 220 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 HIST1H1BP16401 226 aaKnown RBP11.04□□□□□ -0.64
CTCFL-217ENST00000608425 ACKR3P25106 362 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 GABRR2P28476 465 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 AHRP35869 848 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 MTNR1BP49286 362 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 AP3S2P59780 193 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 TNFRSF9Q07011 255 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 RGNQ15493 299 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 ODF4Q2M2E3 257 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 MARC1Q5VT66 337 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 RNLSQ5VYX0 342 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 UNQ6126/PRO20091Q6UXV3 157 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 GDPD4Q6W3E5 623 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 PIANPQ8IYJ0 282 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 TTC9BQ8N6N2 239 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 FBXO15Q8NCQ5 510 aaPredicted RBP11.04□□□□□ -0.64
CTCFL-217ENST00000608425 HMCESQ96FZ2 354 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 CNTNAP3BQ96NU0 1288 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 NECAB3Q96P71 396 aaPredicted RBP11.04□□□□□ -0.64
CTCFL-217ENST00000608425 TEAD3Q99594 435 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 POLR2J3Q9H1A7 115 aaKnown RBP11.04□□□□□ -0.64
CTCFL-217ENST00000608425 LRRN3Q9H3W5 708 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 POPDC3Q9HBV1 291 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 CBLCQ9ULV8 474 aa11.04□□□□□ -0.64
CTCFL-217ENST00000608425 TMEM129A0AVI4 362 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 PYCARD-AS1I3L0S3 204 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 SYT5O00445 386 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 PPM1DO15297 605 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 HMBSP08397 361 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 UBBP0CG47 229 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 CPN1P15169 458 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 MGMTP16455 207 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 ZNF25P17030 456 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-217ENST00000608425 HTR2AP28223 471 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 MPIP34949 423 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 YBEYP58557 167 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-217ENST00000608425 IL2P60568 153 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 RPS27AP62979 156 aaKnown RBP11.03□□□□□ -0.64
CTCFL-217ENST00000608425 UBA52P62987 128 aaKnown RBP11.03□□□□□ -0.64
CTCFL-217ENST00000608425 HTRA4P83105 476 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-217ENST00000608425 TAF10Q12962 218 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 GPNMBQ14956 572 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 RSU1Q15404 277 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 LRRC37A5PQ49AS3 106 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 ZNF546Q86UE3 836 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 NPAS4Q8IUM7 802 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 CRIPAKQ8N1N5 446 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 RASGEF1AQ8N9B8 481 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 CD200R1Q8TD46 325 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 ZNF559Q9BR84 538 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 NRSN2Q9GZP1 204 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 CHST8Q9H2A9 424 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 CACYBPQ9HB71 228 aaKnown RBP11.03□□□□□ -0.64
CTCFL-217ENST00000608425 MRPS30Q9NP92 439 aaKnown RBP11.03□□□□□ -0.64
CTCFL-217ENST00000608425 GPATCH2Q9NW75 528 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 TP53TG5Q9Y2B4 290 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 A0A0G2JK05 382 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 PRAF2O60831 178 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 NDUFS3O75489 264 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 KLHL18O94889 574 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 ADH1AP07327 375 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 ST6GAL1P15907 406 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 CD96P40200 585 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 SLC11A1P49279 550 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 HNRNPKP61978 463 aaKnown RBP eCLIP11.03□□□□□ -0.641e-6■■■■□ 23.8
CTCFL-217ENST00000608425 OCLNQ16625 522 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 FBXL22Q6P050 247 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 LINGO2Q7L985 606 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 TMEM200AQ86VY9 491 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 RBM45Q8IUH3 476 aaKnown RBP11.03□□□□□ -0.64
CTCFL-217ENST00000608425 OR52I2Q8NH67 350 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 WFDC6Q9BQY6 131 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 METTL9Q9H1A3 318 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 SIRT7Q9NRC8 400 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 SMCO4Q9NRQ5 59 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 POT1Q9NUX5 634 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 FBXL3Q9UKT7 428 aa11.03□□□□□ -0.64
CTCFL-217ENST00000608425 RFPL4AA6NLU0 287 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms