RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 TSPEARQ8WU66 669 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 WDR60Q8WVS4 1066 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 TMEM234Q8WY98 164 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 LRRC46Q96FV0 321 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 GMPPAQ96IJ6 420 aaPredicted RBP11.11□□□□□ -0.63
C19orf54-208ENST00000598352 ZNF317Q96PQ6 595 aaPredicted RBP11.11□□□□□ -0.63
C19orf54-208ENST00000598352 ZNF559Q9BR84 538 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 RAD21L1Q9H4I0 556 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 PLSCR4Q9NRQ2 329 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 CALML5Q9NZT1 146 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 ING1Q9UK53 422 aaPredicted RBP11.11□□□□□ -0.63
C19orf54-208ENST00000598352 MCTS1Q9ULC4 181 aaKnown RBP11.11□□□□□ -0.63
C19orf54-208ENST00000598352 TRIM33Q9UPN9 1127 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 AKAP9Q99996 3911 aa11.11□□□□□ -0.63
C19orf54-208ENST00000598352 PRR14LQ5THK1 2151 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 CSMD2Q7Z408 3487 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 GJE1A6NN92 205 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 ATP8B1O43520 1251 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 CTAG2O75638 210 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 SMNDC1O75940 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
C19orf54-208ENST00000598352 PGM3O95394 542 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 THBS1P07996 1170 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 ARAFP10398 606 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 IL7RP16871 459 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 ENPP1P22413 925 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 CCKARP32238 428 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 APOBEC1P41238 236 aaKnown RBP11.1□□□□□ -0.63
C19orf54-208ENST00000598352 IDH2P48735 452 aaKnown RBP11.1□□□□□ -0.63
C19orf54-208ENST00000598352 RAC3P60763 192 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 FAM27E3Q08E93 113 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 MYBPHQ13203 477 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 LIN52Q52LA3 116 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 RUNDC3AQ59EK9 446 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 RNF220Q5VTB9 566 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 C3orf33Q6P1S2 294 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 GRINAQ7Z429 371 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 ABHD3Q8WU67 409 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 CPNE4Q96A23 557 aaPredicted RBP11.1□□□□□ -0.63
C19orf54-208ENST00000598352 SPATA9Q9BWV2 254 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 ADAM19Q9H013 955 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 TIGARQ9NQ88 270 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 GLRX2Q9NS18 164 aa11.1□□□□□ -0.63
C19orf54-208ENST00000598352 LEF1Q9UJU2 399 aaPredicted RBP11.1□□□□□ -0.63
C19orf54-208ENST00000598352 ZNF443Q9Y2A4 671 aaPredicted RBP11.1□□□□□ -0.63
C19orf54-208ENST00000598352 ANKRD17O75179 2603 aaKnown RBP11.09□□□□□ -0.63
C19orf54-208ENST00000598352 CFAP73A6NFT4 308 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 TUBAL3A6NHL2 446 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 FBP2O00757 339 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 GKN3PP0CG01 181 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 EPXP11678 715 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 PRG2P13727 222 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 PPIBP23284 216 aaKnown RBP11.09□□□□□ -0.63
C19orf54-208ENST00000598352 AGTR1P30556 359 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 CD79BP40259 229 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 SLC1A3P43003 542 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 CPA2P48052 419 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 SF3A3Q12874 501 aaKnown RBP eCLIP11.09□□□□□ -0.635e-6■■■■■ 39.5
C19orf54-208ENST00000598352 GNA13Q14344 377 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 SYT14P1Q58G82 188 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 GCNT6Q5T4J0 391 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 TMPPEQ6ZT21 453 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 COMTD1Q86VU5 262 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 ZNF440Q8IYI8 595 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 OR6K3Q8NGY3 331 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 NFKBIDQ8NI38 313 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
C19orf54-208ENST00000598352 ARL5BQ96KC2 179 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 OR5B2Q96R09 309 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 CGREF1Q99674 301 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 PRRG4Q9BZD6 226 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 TMEM38AQ9H6F2 299 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 SAR1AQ9NR31 198 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 SERINC1Q9NRX5 453 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 CHRNA9Q9UGM1 479 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 OSGIN1Q9UJX0 560 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 PRDM4Q9UKN5 801 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 FREM1Q5H8C1 2179 aa11.09□□□□□ -0.63
C19orf54-208ENST00000598352 IGHV3-15A0A0B4J1V0 119 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 TMEM72A0PK05 275 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 A6NNC1 897 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 SMAD9O15198 467 aaKnown RBP11.08□□□□□ -0.64
C19orf54-208ENST00000598352 VIMP08670 466 aaKnown RBP11.08□□□□□ -0.64
C19orf54-208ENST00000598352 TROVE2P10155 538 aaKnown RBP eCLIP11.08□□□□□ -0.64
C19orf54-208ENST00000598352 ETS2P15036 469 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 SLC7A1P30825 629 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 UGT2B10P36537 528 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 MDH1P40925 334 aaKnown RBP11.08□□□□□ -0.64
C19orf54-208ENST00000598352 DIO1P49895 249 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 CDK6Q00534 326 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 SELPLGQ14242 412 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 LARS2Q15031 903 aaKnown RBP11.08□□□□□ -0.64
C19orf54-208ENST00000598352 RNPS1Q15287 305 aaKnown RBP11.08□□□□□ -0.64
C19orf54-208ENST00000598352 ZSWIM7Q19AV6 140 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 HSP90B2PQ58FF3 399 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 REEP3Q6NUK4 255 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 PPP4R4Q6NUP7 873 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 C22orf34Q6ZV56 151 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 FCRLAQ7L513 359 aa11.08□□□□□ -0.64
C19orf54-208ENST00000598352 NUFIP2Q7Z417 695 aaKnown RBP11.08□□□□□ -0.64
C19orf54-208ENST00000598352 DHDDSQ86SQ9 333 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms