RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PLGP00747 810 aaPredicted RBP11.64□□□□□ -0.55
USE1-207ENST00000596136 HNRNPCL4P0DMR1 293 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 POU2F1P14859 743 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 IL7RP16871 459 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 AGTR1P30556 359 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 SLC7A1P30825 629 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 DNAJA1P31689 397 aaKnown RBP11.64□□□□□ -0.55
USE1-207ENST00000596136 CCKARP32238 428 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 CPOXP36551 454 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 HTR3AP46098 478 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 CLK1P49759 484 aaKnown RBP11.64□□□□□ -0.55
USE1-207ENST00000596136 CRISP3P54108 245 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 MERTKQ12866 999 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 FADDQ13158 208 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 GNA13Q14344 377 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 SQLEQ14534 574 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 ZSWIM7Q19AV6 140 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 SYT14P1Q58G82 188 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 MRPL2Q5T653 305 aaKnown RBP11.64□□□□□ -0.55
USE1-207ENST00000596136 TMPPEQ6ZT21 453 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 FCRLAQ7L513 359 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 HMGN2P46Q86SG4 172 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 ADGRG3Q86Y34 549 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 MSRB3Q8IXL7 192 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 PEX5LQ8IYB4 626 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 WDR60Q8WVS4 1066 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 NINJ1Q92982 152 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 REXO5Q96IC2 774 aaKnown RBP11.64□□□□□ -0.55
USE1-207ENST00000596136 WFIKKN1Q96NZ8 548 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 SIKE1Q9BRV8 207 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 RAD21L1Q9H4I0 556 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 BCO1Q9HAY6 547 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 BCL2L10Q9HD36 194 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 CTPS2Q9NRF8 586 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 ZNF446Q9NWS9 450 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 SLC25A37Q9NYZ2 338 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 CCDC167Q9P0B6 97 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 SLAMF8Q9P0V8 285 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 CHRNA9Q9UGM1 479 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 MAP1AP78559 2803 aaPredicted RBP11.64□□□□□ -0.55
USE1-207ENST00000596136 F8P00451 2351 aa11.64□□□□□ -0.55
USE1-207ENST00000596136 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
USE1-207ENST00000596136 PRR14LQ5THK1 2151 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 A0A1W2PP18 115 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 PRKD3O94806 890 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 HRGP04196 525 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 YES1P07947 543 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 THBS1P07996 1170 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 ENPP1P22413 925 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 RYKP34925 604 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 SLC1A3P43003 542 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 IDH2P48735 452 aaKnown RBP11.63□□□□□ -0.55
USE1-207ENST00000596136 MAP2K6P52564 334 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 EPS8Q12929 822 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 PAGE3Q5JUK9 113 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 RNF220Q5VTB9 566 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 PPP4R4Q6NUP7 873 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 STAC2Q6ZMT1 411 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 BEND4Q6ZU67 534 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 ZNF440Q8IYI8 595 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 ATP6V1C2Q8NEY4 427 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 OR52P1PQ8NH57 321 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 ZNF563Q8TA94 476 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 ABHD3Q8WU67 409 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 TMEM19Q96HH6 336 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 TACO1Q9BSH4 297 aaKnown RBP11.63□□□□□ -0.55
USE1-207ENST00000596136 ADAM19Q9H013 955 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 OR10A4Q9H209 315 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 RABEP2Q9H5N1 569 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 PLEKHF2Q9H8W4 249 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 A4GALTQ9NPC4 353 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 KLHL13Q9P2N7 655 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 HDGFL3Q9Y3E1 203 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 CHST2Q9Y4C5 530 aa11.63□□□□□ -0.55
USE1-207ENST00000596136 SPIN1Q9Y657 262 aaPredicted RBP11.63□□□□□ -0.55
USE1-207ENST00000596136 CFAP73A6NFT4 308 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 AP3D1O14617 1153 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 SMAD9O15198 467 aaKnown RBP11.62□□□□□ -0.55
USE1-207ENST00000596136 DNPH1O43598 174 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 CYTIPO60759 359 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 PMS2P2O95744 297 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 BCHEP06276 602 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 NUDT7P0C024 238 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 CD1EP15812 388 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 CRYGSP22914 178 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 PPIBP23284 216 aaKnown RBP11.62□□□□□ -0.55
USE1-207ENST00000596136 ACAA2P42765 397 aaKnown RBP11.62□□□□□ -0.55
USE1-207ENST00000596136 DIO1P49895 249 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 CSNK2A1P68400 391 aaPredicted RBP11.62□□□□□ -0.55
USE1-207ENST00000596136 PDK3Q15120 406 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 LIN52Q52LA3 116 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 AGKQ53H12 422 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 METTL21CQ5VZV1 264 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 DLEU7Q6UYE1 221 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 SPNS3Q6ZMD2 512 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 C22orf34Q6ZV56 151 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 VRK2Q86Y07 508 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 TUSC5Q8IXB3 177 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 TSPEARQ8WU66 669 aa11.62□□□□□ -0.55
USE1-207ENST00000596136 NRGNQ92686 78 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms