RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 AKIP1Q9NQ31 210 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 SLAMF8Q9P0V8 285 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 LIPGQ9Y5X9 500 aa17.84■□□□□ 0.45
LSM4-203ENST00000593829 FASNP49327 2511 aaKnown RBP17.84■□□□□ 0.45
LSM4-203ENST00000593829 GCN1Q92616 2671 aaKnown RBP17.83■□□□□ 0.44
LSM4-203ENST00000593829 SUSD5O60279 629 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 HCN1O60741 890 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 BCAS1O75363 584 aaPredicted RBP17.83■□□□□ 0.44
LSM4-203ENST00000593829 ABOP16442 354 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 DCTP40126 519 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 C17orf67Q0P5P2 114 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 ITGADQ13349 1161 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 TRIM16LQ309B1 348 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 COX20Q5RI15 118 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.83■□□□□ 0.44
LSM4-203ENST00000593829 STK32CQ86UX6 486 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 ZNF527Q8NB42 609 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 ZNF555Q8NEP9 628 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 DUSP19Q8WTR2 217 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 ALPK1Q96QP1 1244 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 MBOAT4Q96T53 435 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 CGREF1Q99674 301 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 FUNDC2Q9BWH2 189 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 EXO5Q9H790 373 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 ZNF835Q9Y2P0 537 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 AP3M1Q9Y2T2 418 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 HRH3Q9Y5N1 445 aa17.83■□□□□ 0.44
LSM4-203ENST00000593829 MYO18BQ8IUG5 2567 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 TRGV5A0A0B4J1U4 118 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 A0A1B0GVC2 190 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 G3V2T6 193 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 NDUFB5O43674 189 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 STSP08842 583 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 HTR1AP08908 422 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 HOXB9P17482 250 aaPredicted RBP17.82■□□□□ 0.44
LSM4-203ENST00000593829 PTGS2P35354 604 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 OPRL1P41146 370 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 MVDP53602 400 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 ATP12AP54707 1039 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 ZIK1Q3SY52 487 aaPredicted RBP17.82■□□□□ 0.44
LSM4-203ENST00000593829 FGD2Q7Z6J4 655 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 OR4K17Q8NGC6 315 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 FBLIM1Q8WUP2 373 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 RBM4BQ9BQ04 359 aaKnown RBP17.82■□□□□ 0.44
LSM4-203ENST00000593829 RBM4Q9BWF3 364 aaKnown RBP17.82■□□□□ 0.44
LSM4-203ENST00000593829 ZNF350Q9GZX5 532 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 FBXL2Q9UKC9 423 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 USP22Q9UPT9 525 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 LIPT1Q9Y234 373 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 ESPL1Q14674 2120 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 RELNP78509 3460 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 A0A1W2PQD3 144 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 C17orf51A8MQB3 221 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 CLIC1O00299 241 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 ZNHIT1O43257 154 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 FCMRO60667 390 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 MT-ND1P03886 318 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 GUSBP08236 651 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 CCDC159P0C7I6 412 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 IDUAP35475 653 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 CRATP43155 626 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 AQP6Q13520 282 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 POLE3Q9NRF9 147 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 SLC25A37Q9NYZ2 338 aa17.82■□□□□ 0.44
LSM4-203ENST00000593829 ZGRF1Q86YA3 2104 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 NPIPA5A0A0B4J1W7 369 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 OR14I1A6ND48 311 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 NPIPA7E9PJI5 369 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 NPIPB9F8W1W9 429 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 AQP7O14520 342 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 GMNNO75496 209 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 GABARAPO95166 117 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 NPIPA8P0DM63 369 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 PCMT1P22061 227 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 RYKP34925 604 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 CASP6P55212 293 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 FUT5Q11128 374 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 SPCS2Q15005 226 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 GPR68Q15743 365 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 CTF1Q16619 201 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 GPAT3Q53EU6 434 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 KLHL26Q53HC5 615 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 Q6ZPB1 254 aaPredicted RBP17.81■□□□□ 0.44
LSM4-203ENST00000593829 MISPQ8IVT2 679 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 MSRB3Q8IXL7 192 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 FADS6Q8N9I5 356 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 FAM83FQ8NEG4 500 aaPredicted RBP17.81■□□□□ 0.44
LSM4-203ENST00000593829 NEIL3Q8TAT5 605 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 TRNT1Q96Q11 434 aaKnown RBP17.81■□□□□ 0.44
LSM4-203ENST00000593829 SLC6A15Q9H2J7 730 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 DSN1Q9H410 356 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 MED11Q9P086 117 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 VAPAQ9P0L0 249 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 MKLN1Q9UL63 735 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 WDR45Q9Y484 360 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 SNX5Q9Y5X3 404 aa17.81■□□□□ 0.44
LSM4-203ENST00000593829 IGLV3-32A0A0A0MS00 114 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 ETFAP13804 333 aa17.8■□□□□ 0.44
LSM4-203ENST00000593829 PPIBP23284 216 aaKnown RBP17.8■□□□□ 0.44
LSM4-203ENST00000593829 RFX4Q33E94 735 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms