RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 CLEC4FQ8N1N0 589 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 MIPOL1Q8TD10 442 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 OIT3Q8WWZ8 545 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 ZIM3Q96PE6 472 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 ALG2Q9H553 416 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 FAIMQ9NVQ4 179 aa21.14■□□□□ 0.97
LSM4-202ENST00000593564 CISD1Q9NZ45 108 aaKnown RBP21.14■□□□□ 0.97
LSM4-202ENST00000593564 IGKV3D-15A0A087WSY6 115 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 GOLGA8QA0A0J9YX86 632 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 GOLGA8OA6NCC3 632 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 SHISA9B4DS77 424 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 GOLGA8NF8WBI6 632 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 RAMP1O60894 148 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 PGM3O95394 542 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 CD8AP01732 235 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 GUSBP08236 651 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 PDK3Q15120 406 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 CXXC5Q7LFL8 322 aaKnown RBP21.13■□□□□ 0.97
LSM4-202ENST00000593564 OLIG3Q7RTU3 272 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.13■□□□□ 0.97
LSM4-202ENST00000593564 C16orf62Q7Z3J2 963 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 MTDHQ86UE4 582 aaKnown RBP21.13■□□□□ 0.97
LSM4-202ENST00000593564 FAM71CQ8NEG0 241 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 OR8J2Q8NGG1 315 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 ROPN1BQ9BZX4 212 aaPredicted RBP21.13■□□□□ 0.97
LSM4-202ENST00000593564 OR51I1Q9H343 314 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 ROPN1Q9HAT0 212 aaPredicted RBP21.13■□□□□ 0.97
LSM4-202ENST00000593564 BARX1Q9HBU1 254 aaPredicted RBP21.13■□□□□ 0.97
LSM4-202ENST00000593564 EXD2Q9NVH0 621 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 EMC3Q9P0I2 261 aa21.13■□□□□ 0.97
LSM4-202ENST00000593564 OR5H1A6NKK0 313 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 SULT2B1O00204 365 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 KIAA0513O60268 411 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 AGR2O95994 175 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 PGM1P36871 562 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 CDH11P55287 796 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 IFFO1Q0D2I5 559 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 ZNF433Q8N7K0 673 aaPredicted RBP21.12■□□□□ 0.97
LSM4-202ENST00000593564 SPATA3Q8NHX4 192 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 HS6ST2Q96MM7 605 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 NPAP1Q9NZP6 1156 aa21.12■□□□□ 0.97
LSM4-202ENST00000593564 SPIN1Q9Y657 262 aaPredicted RBP21.12■□□□□ 0.97
LSM4-202ENST00000593564 CHD3Q12873 2000 aaKnown RBP21.12■□□□□ 0.97
LSM4-202ENST00000593564 ABCD4O14678 606 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 TP53P04637 393 aaPredicted RBP21.11■□□□□ 0.97
LSM4-202ENST00000593564 CREB1P16220 341 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 APOBEC1P41238 236 aaKnown RBP21.11■□□□□ 0.97
LSM4-202ENST00000593564 ETV4P43268 484 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 MAPK14Q16539 360 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 FBXW9Q5XUX1 488 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 AP1ARQ63HQ0 302 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 OR4A15Q8NGL6 344 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 RADILQ96JH8 1075 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 CCDC106Q9BWC9 280 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 POLE3Q9NRF9 147 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 PCDHGB4Q9UN71 923 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 SLC35A3Q9Y2D2 325 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 STAB1Q9NY15 2570 aa21.11■□□□□ 0.97
LSM4-202ENST00000593564 RTTNQ86VV8 2226 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 ANKRD28O15084 1053 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 TLX2O43763 284 aaPredicted RBP21.1■□□□□ 0.97
LSM4-202ENST00000593564 TYROBPO43914 113 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 ADAM11O75078 769 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 NDUFS7O75251 213 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 ATAD3BQ5T9A4 648 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 TYW3Q6IPR3 259 aaKnown RBP21.1■□□□□ 0.97
LSM4-202ENST00000593564 ZHX1-C8orf76Q96EF9 292 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 CHRNA9Q9UGM1 479 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 GDF2Q9UK05 429 aaPredicted RBP21.1■□□□□ 0.97
LSM4-202ENST00000593564 NOSIPQ9Y314 301 aaKnown RBP21.1■□□□□ 0.97
LSM4-202ENST00000593564 WDR45Q9Y484 360 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 PLCE1Q9P212 2302 aa21.1■□□□□ 0.97
LSM4-202ENST00000593564 CR1P17927 2039 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 ZNF716A6NP11 495 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 DNPH1O43598 174 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 CD5LO43866 347 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 SCN2BO60939 215 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 BCAS1O75363 584 aaPredicted RBP21.09■□□□□ 0.97
LSM4-202ENST00000593564 PMS2P2O95744 297 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 OR12D1P0DN82 309 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 TFPIP10646 304 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 CASP9P55211 416 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 PDCD2Q16342 344 aaPredicted RBP21.09■□□□□ 0.97
LSM4-202ENST00000593564 AGAP6Q5VW22 663 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 NUDCD3Q8IVD9 361 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 XAGE5Q8WWM1 108 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 APH1AQ96BI3 265 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 DPY30Q9C005 99 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 SAP130Q9H0E3 1048 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 AKTIPQ9H8T0 292 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 CTPS2Q9NRF8 586 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 HDGFL3Q9Y3E1 203 aa21.09■□□□□ 0.97
LSM4-202ENST00000593564 MXRA5Q9NR99 2828 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 PRSS51A0A1B0GVH4 220 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 UQCRC2P22695 453 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 FKBP2P26885 142 aaKnown RBP21.08■□□□□ 0.97
LSM4-202ENST00000593564 FUT5Q11128 374 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 NRF1Q16656 503 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 ANXA8L1Q5VT79 327 aa21.08■□□□□ 0.97
LSM4-202ENST00000593564 TNFAIP8L2Q6P589 184 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms