RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 VASNQ6EMK4 673 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 ARHGAP11AQ6P4F7 1023 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 LINC00114Q6XXX2 140 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 PIWIL3Q7Z3Z3 882 aaKnown RBP10.89□□□□□ -0.67
APOC1-206ENST00000590334 ATG4DQ86TL0 474 aaPredicted RBP10.89□□□□□ -0.67
APOC1-206ENST00000590334 ADGRG3Q86Y34 549 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 CADM2Q8N3J6 435 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 PAPD5Q8NDF8 572 aaKnown RBP10.89□□□□□ -0.67
APOC1-206ENST00000590334 ADAMTS16Q8TE57 1224 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 SLC38A4Q969I6 547 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 SLC47A1Q96FL8 570 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 DUS3LQ96G46 650 aaKnown RBP10.89□□□□□ -0.67
APOC1-206ENST00000590334 SFXN2Q96NB2 322 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 ZNF300Q96RE9 604 aaPredicted RBP10.89□□□□□ -0.67
APOC1-206ENST00000590334 CTPS2Q9NRF8 586 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 NDUFAF4Q9P032 175 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 SPRR3Q9UBC9 169 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 OSGIN1Q9UJX0 560 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 A4GNTQ9UNA3 340 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 SLC6A5Q9Y345 797 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 ZNF337Q9Y3M9 751 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 V9GYQ6 96 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 MPDZO75970 2070 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 ZNF407Q9C0G0 2248 aa10.89□□□□□ -0.67
APOC1-206ENST00000590334 TMED7-TICAM2A0A0A6YYA0 188 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 A0A1B0GTH9 108 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 DHRS12A0PJE2 317 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 ERICH4A6NGS2 130 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 CPSF4LA6NMK7 179 aaKnown RBP10.88□□□□□ -0.67
APOC1-206ENST00000590334 FFAR1O14842 300 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 ZNF208O43345 1280 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 CHP2O43745 196 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 RRP9O43818 475 aaKnown RBP10.88□□□□□ -0.67
APOC1-206ENST00000590334 THY1P04216 161 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 PRB1P04280 392 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 FABP3P05413 133 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 RAP2AP10114 183 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 PNMTP11086 282 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 CPN1P15169 458 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 ITGA2P17301 1181 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 RHCEP18577 417 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 IL11P20809 199 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 GCKP35557 465 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 CDH12P55289 794 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 ACTR3P61158 418 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 RAC1P63000 192 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 CHRNB3Q05901 458 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 SELENBP1Q13228 472 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 FAM98BQ52LJ0 330 aaKnown RBP10.88□□□□□ -0.67
APOC1-206ENST00000590334 ALG10BQ5I7T1 473 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 C3orf33Q6P1S2 294 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 DEF8Q6ZN54 512 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 FGD2Q7Z6J4 655 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 SPATA24Q86W54 205 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 ZDHHC21Q8IVQ6 265 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 OFCC1Q8IZS5 231 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 ST6GALNAC3Q8NDV1 305 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 OR5M1Q8NGP8 315 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 SLC25A43Q8WUT9 341 aaPredicted RBP10.88□□□□□ -0.67
APOC1-206ENST00000590334 CANT1Q8WVQ1 401 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 ABTB1Q969K4 478 aaPredicted RBP10.88□□□□□ -0.67
APOC1-206ENST00000590334 PRRC1Q96M27 445 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 SEPHS2Q99611 448 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 TIMP4Q99727 224 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 SERINC1Q9NRX5 453 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 STOML1Q9UBI4 398 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 RPS6KB2Q9UBS0 482 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 CHRNA9Q9UGM1 479 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 RIMS3Q9UJD0 308 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 ZNF835Q9Y2P0 537 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 TMED7Q9Y3B3 224 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 COL6A6A6NMZ7 2263 aa10.88□□□□□ -0.67
APOC1-206ENST00000590334 GTF3C1Q12789 2109 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 ZFYVE26Q68DK2 2539 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 A0A087WUJ7 227 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 hCG_2039718K7EN88 272 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 BCKDKO14874 412 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 PEPDP12955 493 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 ZNF708P17019 499 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 TCEA1P23193 301 aaKnown RBP10.87□□□□□ -0.67
APOC1-206ENST00000590334 CXCR1P25024 350 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 CLK1P49759 484 aaKnown RBP10.87□□□□□ -0.67
APOC1-206ENST00000590334 CLDN18P56856 261 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 TAS2R41P59536 307 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 HSF1Q00613 529 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 PIN1Q13526 163 aaPredicted RBP10.87□□□□□ -0.67
APOC1-206ENST00000590334 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.87□□□□□ -0.672e-10■■□□□ 11.4
APOC1-206ENST00000590334 DCST1Q5T197 706 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 GDF7Q7Z4P5 450 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 ZNF605Q86T29 641 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 GGNQ86UU5 652 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 CYP4Z1Q86W10 505 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 LILRA2Q8N149 483 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 MIB2Q96AX9 1013 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 SLCO4A1Q96BD0 722 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 SARAFQ96BY9 339 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 SLC41A3Q96GZ6 507 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 MPP4Q96JB8 637 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 DHRS1Q96LJ7 313 aa10.87□□□□□ -0.67
APOC1-206ENST00000590334 ZNF347Q96SE7 839 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms