RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 DIO1P49895 249 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 LTBQ06643 244 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 TAB1Q15750 504 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 GPAT3Q53EU6 434 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 SYT14P1Q58G82 188 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 HHATQ5VTY9 493 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 SHEQ5VZ18 495 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 ABLIM2Q6H8Q1 611 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 OGFOD2Q6N063 350 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 CLEC9AQ6UXN8 241 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 EIF3MQ7L2H7 374 aaKnown RBP11.23□□□□□ -0.61
RFX1-207ENST00000589937 HOMEZQ8IX15 550 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 KBTBD8Q8NFY9 601 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 ST8SIA1Q92185 356 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 PIGTQ969N2 578 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 ARL5BQ96KC2 179 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 COX4I2Q96KJ9 171 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 PIP5K1AQ99755 562 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 CCDC106Q9BWC9 280 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 TIGARQ9NQ88 270 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 ACER3Q9NUN7 267 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 EXD2Q9NVH0 621 aa11.23□□□□□ -0.61
RFX1-207ENST00000589937 CCDC154A6NI56 674 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 DUXAA6NLW8 204 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 HS3ST1O14792 307 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 CLOCKO15516 846 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 CYTIPO60759 359 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 SNNO75324 88 aaPredicted RBP11.22□□□□□ -0.61
RFX1-207ENST00000589937 LY6G6DO95868 133 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 YES1P07947 543 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 PABPC4LP0CB38 370 aaKnown RBP11.22□□□□□ -0.61
RFX1-207ENST00000589937 PPP3CBP16298 524 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 FPR1P21462 350 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 NTF4P34130 210 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 OR3A2P47893 321 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 CLNS1AP54105 237 aaKnown RBP11.22□□□□□ -0.61
RFX1-207ENST00000589937 NR1H2P55055 460 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 RAC3P60763 192 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 RASGEF1BQ0VAM2 473 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 CAPRIN1Q14444 709 aaKnown RBP11.22□□□□□ -0.61
RFX1-207ENST00000589937 MAPK11Q15759 364 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 STK11Q15831 433 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 GTDC1Q4AE62 458 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 SFRP5Q5T4F7 317 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 ATAD3BQ5T9A4 648 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 ANXA8L1Q5VT79 327 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 BIVMQ86UB2 503 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 AKAP1Q92667 903 aaKnown RBP eCLIP11.22□□□□□ -0.61
RFX1-207ENST00000589937 KISS1RQ969F8 398 aaPredicted RBP11.22□□□□□ -0.61
RFX1-207ENST00000589937 SAP130Q9H0E3 1048 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 SLC38A1Q9H2H9 487 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 BCO1Q9HAY6 547 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 NPAP1Q9NZP6 1156 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 PCDHGB4Q9UN71 923 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 GPR52Q9Y2T5 361 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 GPR45Q9Y5Y3 372 aa11.22□□□□□ -0.61
RFX1-207ENST00000589937 HEATR1Q9H583 2144 aaKnown RBP11.21□□□□□ -0.61
RFX1-207ENST00000589937 SULT2B1O00204 365 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 TFPIP10646 304 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 PGCP20142 388 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 IGHV1-2P23083 117 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.61
RFX1-207ENST00000589937 BSPH1Q075Z2 132 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 SLC9B1Q4ZJI4 515 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 GTF2IRD2BQ6EKJ0 949 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 ADAM5Q6NVV9 412 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 BHLHA15Q7RTS1 189 aaPredicted RBP11.21□□□□□ -0.61
RFX1-207ENST00000589937 GTF2IRD2Q86UP8 949 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 LRRC75A-AS1Q8N1F1 130 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 STEAP2Q8NFT2 490 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 OR9I1Q8NGQ6 314 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 ZNF563Q8TA94 476 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 AURKBQ96GD4 344 aaPredicted RBP11.21□□□□□ -0.61
RFX1-207ENST00000589937 OR52E6Q96RD3 313 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 PANX1Q96RD7 426 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 TACO1Q9BSH4 297 aaKnown RBP11.21□□□□□ -0.61
RFX1-207ENST00000589937 GSX2Q9BZM3 304 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 KLHL9Q9P2J3 617 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 CHRNA9Q9UGM1 479 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 BTNL2Q9UIR0 455 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 SLC35A3Q9Y2D2 325 aa11.21□□□□□ -0.61
RFX1-207ENST00000589937 SONP18583 2426 aaKnown RBP11.21□□□□□ -0.61
RFX1-207ENST00000589937 ZC3H12DA2A288 527 aaKnown RBP11.2□□□□□ -0.62
RFX1-207ENST00000589937 ZNF716A6NP11 495 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 ARHGEF9O43307 516 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 SOX30O94993 753 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 PGRP06401 933 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 SOD3P08294 240 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 COX5AP20674 150 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 RPS4Y1P22090 263 aaKnown RBP11.2□□□□□ -0.62
RFX1-207ENST00000589937 IDH2P48735 452 aaKnown RBP11.2□□□□□ -0.62
RFX1-207ENST00000589937 MVDP53602 400 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 MAGOHP61326 146 aaKnown RBP11.2□□□□□ -0.62
RFX1-207ENST00000589937 KCNJ10P78508 379 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 HPCAP84074 193 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 SPOCK1Q08629 439 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 DPY19L1Q2PZI1 675 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 RPS26P11Q5JNZ5 115 aaPredicted RBP11.2□□□□□ -0.62
RFX1-207ENST00000589937 NCMAPQ5T1S8 102 aa11.2□□□□□ -0.62
RFX1-207ENST00000589937 MRPL2Q5T653 305 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms