RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SMPD3Q9NY59 655 aaPredicted RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 TUBA8Q9NY65 449 aaPredicted RBP10.27□□□□□ -0.77
VMP1-207ENST00000588131 VDAC3Q9Y277 283 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 SPTBN4Q9H254 2564 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 PCNX3Q9H6A9 2034 aa10.27□□□□□ -0.77
VMP1-207ENST00000588131 CACNA1GO43497 2377 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 IGKV1D-42A0A075B6H8 117 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 MED19A0JLT2 244 aaPredicted RBP10.26□□□□□ -0.77
VMP1-207ENST00000588131 LRRC3CA6NJW4 275 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 ELOA3DA6NLF2 546 aaPredicted RBP10.26□□□□□ -0.77
VMP1-207ENST00000588131 H0YJX3 145 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 RRP8O43159 456 aaKnown RBP10.26□□□□□ -0.77
VMP1-207ENST00000588131 ANXA8P13928 327 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 CCNA2P20248 432 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 CNR1P21554 472 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 TCEA1P23193 301 aaKnown RBP10.26□□□□□ -0.77
VMP1-207ENST00000588131 RBM34P42696 430 aaKnown RBP10.26□□□□□ -0.77
VMP1-207ENST00000588131 GPR4P46093 362 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 DLX5P56178 289 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 ARG2P78540 354 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 FOXK1P85037 733 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 FOXF1Q12946 379 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 PLPPR5Q32ZL2 321 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 ELOA3BQ3SY89 546 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 C6orf52Q5T4I8 152 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 TIGD3Q6B0B8 471 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 C1orf94Q6P1W5 598 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 TTC33Q6PID6 262 aaPredicted RBP10.26□□□□□ -0.77
VMP1-207ENST00000588131 POMZP3Q6PJE2 187 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 KLHL17Q6TDP4 642 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 IGFL2Q6UWQ7 119 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 GRINAQ7Z429 371 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 LINC00471Q8N535 108 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 ELOA3Q8NG57 546 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 OR1J4Q8NGS1 313 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 PIGXQ8TBF5 258 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 POC1BQ8TC44 478 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 C1GALT1C1Q96EU7 318 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 FAM46AQ96IP4 442 aaKnown RBP10.26□□□□□ -0.77
VMP1-207ENST00000588131 MPP4Q96JB8 637 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 GNRHR2Q96P88 292 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 DGCR6LQ9BY27 220 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 TOR3AQ9H497 397 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 KLHL1Q9NR64 748 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 KRT84Q9NSB2 600 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 C20orf141Q9NUB4 165 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 SELENONQ9NZV5 590 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 OSGIN1Q9UJX0 560 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 MGAT4BQ9UQ53 548 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 CSAG2Q9Y5P2 127 aa10.26□□□□□ -0.77
VMP1-207ENST00000588131 TMED7-TICAM2A0A0A6YYA0 188 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 TMEM72A0PK05 275 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 K7ENP7 123 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 TAF4O00268 1085 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 ETV2O00321 342 aaPredicted RBP10.25□□□□□ -0.77
VMP1-207ENST00000588131 CDK2AP1O14519 115 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 KLF4O43474 513 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 ADAP00813 363 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 SP1P08047 785 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 PNMTP11086 282 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 IFI30P13284 250 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 MAKP20794 623 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 POLR2IP36954 125 aaKnown RBP10.25□□□□□ -0.77
VMP1-207ENST00000588131 ZNF41P51814 821 aaPredicted RBP10.25□□□□□ -0.77
VMP1-207ENST00000588131 POLR2HP52434 150 aaKnown RBP10.25□□□□□ -0.77
VMP1-207ENST00000588131 PRKCDQ05655 676 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 FOXO1Q12778 655 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 MERTKQ12866 999 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 SLC25A53Q5H9E4 307 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 NHSL2Q5HYW2 709 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 BROXQ5VW32 411 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 SLC25A25Q6KCM7 469 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 INO80CQ6PI98 192 aaPredicted RBP10.25□□□□□ -0.77
VMP1-207ENST00000588131 RRM2BQ7LG56 351 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 ADGRG3Q86Y34 549 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 SULF2Q8IWU5 870 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 RNF113BQ8IZP6 322 aaKnown RBP10.25□□□□□ -0.77
VMP1-207ENST00000588131 OR2M7Q8NG81 312 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 OR5M1Q8NGP8 315 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 GNPDA2Q8TDQ7 276 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 TMEM234Q8WY98 164 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 ST8SIA1Q92185 356 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 HAS2Q92819 552 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 HS6ST2Q96MM7 605 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 UCK2Q9BZX2 261 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.25□□□□□ -0.77
VMP1-207ENST00000588131 RIBC2Q9H4K1 309 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 C12orf10Q9HB07 376 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 HHATLQ9HCP6 504 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 PAPOLBQ9NRJ5 636 aaKnown RBP10.25□□□□□ -0.77
VMP1-207ENST00000588131 PRDM4Q9UKN5 801 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 TMED7Q9Y3B3 224 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 MED31Q9Y3C7 131 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 LRRC42Q9Y546 428 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 AP4B1Q9Y6B7 739 aa10.25□□□□□ -0.77
VMP1-207ENST00000588131 SPTBN2O15020 2390 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 ENO4A6NNW6 628 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 FAM47E-STBD1D6RA91 191 aa10.24□□□□□ -0.77
VMP1-207ENST00000588131 LRRN3E7EW58 273 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms