RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 C3orf38Q5JPI3 329 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 MEDAGQ5VYS4 303 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 PLAG1Q6DJT9 500 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 GTF2IRD2BQ6EKJ0 949 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 GLRX5Q86SX6 157 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 ATG4DQ86TL0 474 aaPredicted RBP18.13■□□□□ 0.49
TRIM47-204ENST00000587339 GTF2IRD2Q86UP8 949 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 CLVS1Q8IUQ0 354 aaPredicted RBP18.13■□□□□ 0.49
TRIM47-204ENST00000587339 STX19Q8N4C7 294 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 OR13F1Q8NGS4 319 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 OR5W2Q8NH69 310 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 TMEM163Q8TC26 289 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 SLC22A8Q8TCC7 542 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 PRRX2Q99811 253 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 SLC19A3Q9BZV2 496 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 SPRY4Q9C004 299 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 YIPF3Q9GZM5 350 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 HHATLQ9HCP6 504 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 CNOT2Q9NZN8 540 aaKnown RBP18.13■□□□□ 0.49
TRIM47-204ENST00000587339 RSL24D1Q9UHA3 163 aaKnown RBP18.13■□□□□ 0.49
TRIM47-204ENST00000587339 TCFL5Q9UL49 500 aa18.13■□□□□ 0.49
TRIM47-204ENST00000587339 OTOGLQ3ZCN5 2332 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 HCN1O60741 890 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 SEC14L2O76054 403 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 PGCP20142 388 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 MAP2K4P45985 399 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 P2RX1P51575 399 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 MVKQ03426 396 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 SYT14P1Q58G82 188 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 STPG1Q5TH74 334 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 SMARCD3Q6STE5 483 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 NUP54Q7Z3B4 507 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 BCDIN3DQ7Z5W3 292 aaKnown RBP18.12■□□□□ 0.49
TRIM47-204ENST00000587339 MISPQ8IVT2 679 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 OR11G2Q8NGC1 345 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 OR51A7Q8NH64 312 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 DUSP19Q8WTR2 217 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 CT55Q8WUE5 264 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 FAR1Q8WVX9 515 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 RORBQ92753 470 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 MUL1Q969V5 352 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 PLEKHA8Q96JA3 519 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 KLHDC3Q9BQ90 382 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 UBQLN3Q9H347 655 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 GPR52Q9Y2T5 361 aa18.12■□□□□ 0.49
TRIM47-204ENST00000587339 TRAV27A0A087WT01 109 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 SURF4O15260 269 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 STSP08842 583 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 CDK4P11802 303 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 MASP1P48740 699 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 TUBA3CQ13748 450 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 CBFBQ13951 182 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 CYP4Z2PQ8N1L4 340 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 M1APQ8TC57 530 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 TTC9Q92623 222 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 FGF11Q92914 225 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 HGDQ93099 445 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 ZNF524Q96C55 264 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 ACOT13Q9NPJ3 140 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 FAM86C1Q9NVL1 165 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 FOXJ2Q9P0K8 574 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 RPL36Q9Y3U8 105 aaKnown RBP18.11■□□□□ 0.49
TRIM47-204ENST00000587339 NSG1A0A0A6YYJ2 146 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 ZNF99A8MXY4 864 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-204ENST00000587339 INMTO95050 263 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 HMGN1P05114 100 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 RAB40ALP0C0E4 278 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 TACR3P29371 465 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 SLC15A1P46059 708 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 MLLT10P55197 1068 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 RPS18P62269 152 aaKnown RBP18.11■□□□□ 0.49
TRIM47-204ENST00000587339 GPR107Q5VW38 600 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 NDUFAF7Q7L592 441 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 NMD3Q96D46 503 aaKnown RBP18.11■□□□□ 0.49
TRIM47-204ENST00000587339 SGTBQ96EQ0 304 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 RASL10BQ96S79 203 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 ENKD1Q9H0I2 346 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 MMP25Q9NPA2 562 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 MED17Q9NVC6 651 aa18.11■□□□□ 0.49
TRIM47-204ENST00000587339 SOCS6O14544 535 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 PTP4A3O75365 173 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 PIPP12273 146 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-204ENST00000587339 TOMM34Q15785 309 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-204ENST00000587339 RTL4Q6ZR62 310 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 B4GALNT2Q8NHY0 566 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 ZNF582Q96NG8 517 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-204ENST00000587339 TMEM43Q9BTV4 400 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 ADAM19Q9H013 955 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 C12orf10Q9HB07 376 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 FARSAQ9Y285 508 aaKnown RBP18.1■□□□□ 0.49
TRIM47-204ENST00000587339 IGKV1D-42A0A075B6H8 117 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 A0A1W2PQ72 361 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 HTR3EA5X5Y0 456 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 BHLHE40O14503 412 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 CELA2AP08217 269 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 DBTP11182 482 aaKnown RBP18.1■□□□□ 0.49
TRIM47-204ENST00000587339 RPS15P62841 145 aaKnown RBP18.1■□□□□ 0.49
TRIM47-204ENST00000587339 ZNF91Q05481 1191 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 C17orf67Q0P5P2 114 aa18.1■□□□□ 0.49
TRIM47-204ENST00000587339 LYPD8Q6UX82 237 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms